RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NR2F1P10589 423 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 COX6A1P12074 109 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 ATP6V1B2P21281 511 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 GABRA3P34903 492 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 MAP3K8P41279 467 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PTDSS1P48651 473 aaKnown RBP16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 ERFP50548 548 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC26A5P58743 744 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 VEZF1Q14119 521 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PROSER1Q86XN7 944 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 AMER2Q8N7J2 671 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 COX18Q8N8Q8 333 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 BHLHE22Q8NFJ8 381 aaPredicted RBP16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 OR11G2Q8NGC1 345 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 HOXB13Q92826 284 aaPredicted RBP16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 STMN2Q93045 179 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 VMP1Q96GC9 406 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 LRGUKQ96M69 825 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 TRIM15Q9C019 465 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 DUSP22Q9NRW4 184 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PPIEQ9UNP9 301 aaKnown RBP16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 ANGPT4Q9Y264 503 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PCDHGB3Q9Y5G1 929 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PRAMEF27A3QJZ7 478 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 OR6C76A6NM76 312 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 A8MVJ9 347 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 AQP1P29972 269 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PSG6Q00889 435 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 IL10RAQ13651 578 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 CCNIQ14094 377 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 MYBPC3Q14896 1274 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SYPL1Q16563 259 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 TBC1D25Q3MII6 688 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 GPAT3Q53EU6 434 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 CMPK2Q5EBM0 449 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 LCN8Q6JVE9 175 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 REEP3Q6NUK4 255 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC29A4Q7RTT9 530 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SPPL2CQ8IUH8 684 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC30A8Q8IWU4 369 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 C9orf40Q8IXQ3 194 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 ANKFN1Q8N957 763 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 APCDD1LQ8NCL9 501 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 PIK3R3Q92569 461 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 FAM162AQ96A26 154 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 TMEM19Q96HH6 336 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 GAL3ST4Q96RP7 486 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 SEMA4CQ9C0C4 833 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 GIN1Q9NXP7 522 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 LIPT1Q9Y234 373 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 TTC36A6NLP5 189 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 CREG1O75629 220 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 SOX30O94993 753 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 NKX2-2O95096 273 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 POLE2P56282 527 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 FUT5Q11128 374 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 NNATQ16517 81 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 BTBD16Q32M84 506 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 INTS11Q5TA45 600 aaKnown RBP16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 HLA-DQA1Q5Y7H0 255 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 NDUFAF7Q7L592 441 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 RAB43Q86YS6 212 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 NSMCE2Q96MF7 247 aa16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF223Q9UK11 482 aaPredicted RBP16.52■□□□□ 0.24
PTCHD3-202ENST00000622555 NSG1A0A0A6YYJ2 146 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 TRBV11-1A0A0K0K1C0 115 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 C2orf92A0A1B0GVN3 265 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 A0A1W2PQ72 361 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 GXYLT2A0PJZ3 443 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 LIFP15018 202 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 POU6F2P78424 691 aaPredicted RBP16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 HPCAP84074 193 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 GNA13Q14344 377 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 EBPQ15125 230 aaKnown RBP16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 MAPK11Q15759 364 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 EXT1Q16394 746 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 RPS26P11Q5JNZ5 115 aaPredicted RBP16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 HEPHL1Q6MZM0 1159 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 NPSR1Q6W5P4 371 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 GALNT10Q86SR1 603 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 VASH2Q86V25 355 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 METTL25Q8N6Q8 603 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 NRG4Q8WWG1 115 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 NACC2Q96BF6 587 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 RMND5BQ96G75 393 aaPredicted RBP16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 VPS50Q96JG6 964 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 BTBD9Q96Q07 612 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 BTBD2Q9BX70 525 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 WWTR1Q9GZV5 400 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 GORASP2Q9H8Y8 452 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 Q9N2J8 555 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 WASF3Q9UPY6 502 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 GPR55Q9Y2T6 319 aaPredicted RBP16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 OR10H1Q9Y4A9 318 aa16.51■□□□□ 0.23
PTCHD3-202ENST00000622555 PRKNO60260 465 aaPredicted RBP16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CHRM4P08173 479 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CT45A8P0DMV1 189 aa16.5■□□□□ 0.23
PTCHD3-202ENST00000622555 CT45A9P0DMV2 189 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms