RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TAS2R41P59536 307 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ERVK-21P61565 698 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 RPS25P62851 125 aaKnown RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 LSM11P83369 360 aaKnown RBP eCLIP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 IFITM2Q01629 132 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CHRNEQ04844 493 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SCN1BQ07699 218 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 TGM3Q08188 693 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 RUNX3Q13761 415 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 LASP1Q14847 261 aaKnown RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 RPE65Q16518 533 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CARTPTQ16568 116 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 BAK1Q16611 211 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF750Q32MQ0 723 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CCDC92Q53HC0 331 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF628Q5EBL2 1059 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF311Q5JNZ3 666 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ARMC4Q5T2S8 1044 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 AADACL4Q5VUY2 407 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 C18orf63Q68DL7 685 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 HEPHL1Q6MZM0 1159 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 METAP1DQ6UB28 335 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SZRD1Q7Z422 152 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 NRARPQ7Z6K4 114 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 RDH10Q8IZV5 341 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 HDDC3Q8N4P3 179 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 C12orf76Q8N812 135 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 POGLUT1Q8NBL1 392 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ANKK1Q8NFD2 765 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 NUP43Q8NFH3 380 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR2L3Q8NG85 312 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR6F1Q8NGZ6 308 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 NT5CQ8TCD5 201 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ACOT11Q8WXI4 607 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 HERVK_113Q902F9 699 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 TM9SF4Q92544 642 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 OSTF1Q92882 214 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 UFD1Q92890 307 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 FAM131CQ96AQ9 280 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ELP4Q96EB1 424 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 GIMAP5Q96F15 307 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 C10orf90Q96M02 699 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SOSTQ9BQB4 213 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 YIPF4Q9BSR8 244 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ACTRT3Q9BYD9 372 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 EGLN3Q9H6Z9 239 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 NEK6Q9HC98 313 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 ABCB9Q9NP78 766 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 SLC13A4Q9UKG4 626 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CARD8Q9Y2G2 431 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 CHST2Q9Y4C5 530 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR1A2Q9Y585 309 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 C2orf16Q68DN1 1984 aa9.02□□□□□ -0.97
IGHV3-54-201ENST00000622166 A0A1W2PQ09 198 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 GSAPA4D1B5 854 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 ANTXRLA6NF34 631 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 GLOD5A6NK44 160 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 POLR1CO15160 346 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 KAT7O95251 611 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 AGR2O95994 175 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 IGHA1P01876 353 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 HMGN1P05114 100 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 KRT8P05787 483 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 CCNYL3P0C7X3 344 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 GALP22466 123 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 GJA4P35212 333 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 STXBP1P61764 594 aaKnown RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 PPP3R1P63098 170 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 HNRNPA0Q13151 305 aaKnown RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 LRRC32Q14392 662 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 KRT33BQ14525 404 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 CRTC2Q53ET0 693 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZMAT1Q5H9K5 638 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 RSBN1Q5VWQ0 802 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 C22orf42Q6IC83 251 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 CDC73Q6P1J9 531 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 PSRC1Q6PGN9 363 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 TMEM107Q6UX40 140 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF730Q6ZMV8 503 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 ZNF517Q6ZMY9 492 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 PAQR7Q86WK9 346 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 VRK2Q86Y07 508 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 PEX5LQ8IYB4 626 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR4Q3Q8NH05 313 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 OR52N1Q8NH53 320 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 FGF13Q92913 245 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 RFKQ969G6 155 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 GAL3ST3Q96A11 431 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 CHFRQ96EP1 664 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 OTUB1Q96FW1 271 aaPredicted RBP9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 SLC35A4Q96G79 324 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 NEDD4LQ96PU5 975 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 SNX18Q96RF0 628 aa9.01□□□□□ -0.97
IGHV3-54-201ENST00000622166 KATNB1Q9BVA0 655 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms