RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ATAD3CQ5T2N8 411 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 C6orf89Q6UWU4 347 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 TMUB2Q71RG4 321 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ERO1BQ86YB8 467 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 HIPK1Q86Z02 1210 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 UXS1Q8NBZ7 420 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 AKR7LQ8NHP1 331 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 MRAPQ8TCY5 172 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 NT5C3BQ969T7 300 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 MSANTD3Q96H12 275 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF560Q96MR9 790 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 PSKH2Q96QS6 385 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 TNFRSF13CQ96RJ3 184 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 GPA33Q99795 319 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 TBC1D10AQ9BXI6 508 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 C10orf88Q9H8K7 445 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 MARCH7Q9H992 704 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 RPF1Q9H9Y2 349 aaKnown RBP3.24□□□□□ -1.89
BRCA1-229ENST00000621897 DEPPQ9NTK1 212 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 SNX7Q9UNH6 387 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 NCKAP1Q9Y2A7 1128 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 C15orf41Q9Y2V0 281 aa3.24□□□□□ -1.89
BRCA1-229ENST00000621897 MRPS2Q9Y399 296 aaKnown RBP3.24□□□□□ -1.89
BRCA1-229ENST00000621897 UMODL1Q5DID0 1318 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 A0A075B6Q4 140 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TRBV5-4A0A0C4DH59 114 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 C13orf42A0A1B0GVH6 325 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 GOLGA8OA6NCC3 632 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 GOLGA8NF8WBI6 632 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 DNALI1O14645 258 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TBX19O60806 448 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 MFN2O95140 757 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 ANGPTL1O95841 491 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 AGTP01019 485 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 KRT14P02533 472 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 RLN1P04808 185 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 FUT1P19526 365 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TIA1P31483 386 aaKnown RBP eCLIP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 SLC1A4P43007 532 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 CRKLP46109 303 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 PTENP60484 403 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 BNIP1Q12981 228 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 SNTB2Q13425 540 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TSTA3Q13630 321 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 RUNX3Q13761 415 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 UGCGQ16739 394 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF506Q5JVG8 444 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 FHL5Q5TD97 284 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 LIN9Q5TKA1 542 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 PDPK2PQ6A1A2 396 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 OR6B2Q6IFH4 312 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 PRSS42Q7Z5A4 293 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 NKAIN4Q8IVV8 208 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 SERPINA12Q8IW75 414 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 CD302Q8IX05 232 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 CCDC65Q8IXS2 484 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 C4orf19Q8IY42 314 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 FAM9CQ8IZT9 166 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 Q8N7P7 452 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 LEMD2Q8NC56 503 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 OR2T3Q8NH03 318 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 OR52J3Q8NH60 311 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 NCOA7Q8NI08 942 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TMIGD2Q96BF3 282 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 ZBED3Q96IU2 234 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TTC25Q96NG3 672 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 MRPL37Q9BZE1 423 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 CRNKL1Q9BZJ0 848 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 PKIBQ9C010 78 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 VCX2Q9H322 139 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 DPEP2Q9H4A9 486 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 RNPEPL1Q9HAU8 725 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 FARSBQ9NSD9 589 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 ABCD2Q9UBJ2 740 aa3.23□□□□□ -1.89
BRCA1-229ENST00000621897 DBF4Q9UBU7 674 aaPredicted RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 TDRD6O60522 2096 aaKnown RBP3.23□□□□□ -1.89
BRCA1-229ENST00000621897 NOTCH2Q04721 2471 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 PTCH1Q13635 1447 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 GSAPA4D1B5 854 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 VGLL3A8MV65 326 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RSPH10B2B2RC85 870 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF732B4DXR9 585 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TCP10L2B9ZVM9 353 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 NPIPA3F8WFD2 350 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 PRRG1O14668 218 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 FLRT2O43155 660 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TTI1O43156 1089 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 PPIP5K2O43314 1243 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 FCGR3BO75015 233 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 IGHG1P01857 330 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 CXCL10P02778 98 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 PGK2P07205 417 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 HCKP08631 526 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RSPH10BP0C881 870 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 TROVE2P10155 538 aaKnown RBP eCLIP3.22□□□□□ -1.89
BRCA1-229ENST00000621897 RALBP11234 206 aa3.22□□□□□ -1.89
BRCA1-229ENST00000621897 CPN2P22792 545 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms