RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ZNF605Q86T29 641 aa20■□□□□ 0.79
SPAST-204ENST00000621856 OR4D11Q8NGI4 311 aa20■□□□□ 0.79
SPAST-204ENST00000621856 OR4C15Q8NGM1 316 aa20■□□□□ 0.79
SPAST-204ENST00000621856 PTCHD1Q96NR3 888 aa20■□□□□ 0.79
SPAST-204ENST00000621856 OR1F2PQ96R84 312 aa20■□□□□ 0.79
SPAST-204ENST00000621856 CNPPD1Q9BV87 410 aa20■□□□□ 0.79
SPAST-204ENST00000621856 LANCL2Q9NS86 450 aa20■□□□□ 0.79
SPAST-204ENST00000621856 FAM118AQ9NWS6 357 aa20■□□□□ 0.79
SPAST-204ENST00000621856 PDP2Q9P2J9 529 aa20■□□□□ 0.79
SPAST-204ENST00000621856 RHCGQ9UBD6 479 aa20■□□□□ 0.79
SPAST-204ENST00000621856 MKLN1Q9UL63 735 aa20■□□□□ 0.79
SPAST-204ENST00000621856 MMACHCQ9Y4U1 282 aa20■□□□□ 0.79
SPAST-204ENST00000621856 CLDN16Q9Y5I7 305 aa20■□□□□ 0.79
SPAST-204ENST00000621856 MITFO75030 526 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 SEC24DO94855 1032 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 TNNI3P19429 210 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 GABRA3P34903 492 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 PGDP52209 483 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 FOXD4Q12950 439 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 DCST2Q5T1A1 773 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 CCNJQ5T5M9 372 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 KDM4DQ6B0I6 523 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 FRRS1Q6ZNA5 592 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 USP51Q70EK9 711 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 VRK2Q86Y07 508 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 RBM45Q8IUH3 476 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 LACC1Q8IV20 430 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 TAGAPQ8N103 731 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 OR52P1PQ8NH57 321 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 PHF10Q8WUB8 498 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 PIK3R3Q92569 461 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 CNDP2Q96KP4 475 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 SDF2Q99470 211 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 MTHFD2LQ9H903 347 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 KRT84Q9NSB2 600 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 SRPK3Q9UPE1 567 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 BDP1A6H8Y1 2624 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 KHNYNO15037 678 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 HYAL3O43820 417 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 FCMRO60667 390 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 ZIC2O95409 532 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 LGI1O95970 557 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 CDH2P19022 906 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 S1PR1P21453 382 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 SSTR4P31391 388 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 TPD52P55327 224 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 DUSP8Q13202 625 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 BIKQ13323 160 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 ZNHIT3Q15649 155 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 MINDY4Q4G0A6 757 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 TYW3Q6IPR3 259 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 TCEAL6Q6IPX3 200 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 FAHD1Q6P587 224 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 COMTD1Q86VU5 262 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 PEX5LQ8IYB4 626 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 CHDHQ8NE62 594 aaPredicted RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 OR10G2Q8NGC3 310 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 TCEAL3Q969E4 200 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 OR6C1Q96RD1 312 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 GFM1Q96RP9 751 aaKnown RBP19.99■□□□□ 0.79
SPAST-204ENST00000621856 RIBC2Q9H4K1 309 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 ZNF696Q9H7X3 374 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 FOLH1BQ9HBA9 442 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 ACER3Q9NUN7 267 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 SATB2Q9UPW6 733 aa19.99■□□□□ 0.79
SPAST-204ENST00000621856 AK1P00568 194 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 POU6F2P78424 691 aaPredicted RBP19.98■□□□□ 0.79
SPAST-204ENST00000621856 MICAQ29983 383 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 PHF19Q5T6S3 580 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 TTC33Q6PID6 262 aaPredicted RBP19.98■□□□□ 0.79
SPAST-204ENST00000621856 ZG16BQ96DA0 208 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 RNF31Q96EP0 1072 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 WFDC6Q9BQY6 131 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 ERVK-19Q9WJR5 959 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 MYRFQ9Y2G1 1151 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 IFT52Q9Y366 437 aa19.98■□□□□ 0.79
SPAST-204ENST00000621856 HEMK1Q9Y5R4 338 aaPredicted RBP19.98■□□□□ 0.79
SPAST-204ENST00000621856 NUP210LQ5VU65 1888 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 HRKO00198 91 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 SYT5O00445 386 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 PRAMEF2O60811 474 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 STX11O75558 287 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 EPPINO95925 133 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 PIGAP37287 484 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 GPR68Q15743 365 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 COLEC12Q5KU26 742 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 TCTN3Q6NUS6 607 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 ZC3H14Q6PJT7 736 aaKnown RBP19.97■□□□□ 0.79
SPAST-204ENST00000621856 ZNF786Q8N393 782 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 PIK3C3Q8NEB9 887 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 RMND5BQ96G75 393 aaPredicted RBP19.97■□□□□ 0.79
SPAST-204ENST00000621856 LOXL4Q96JB6 756 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 ZNF578Q96N58 590 aaPredicted RBP19.97■□□□□ 0.79
SPAST-204ENST00000621856 MUS81Q96NY9 551 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 KCND3Q9UK17 655 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 ZNF232Q9UNY5 417 aa19.97■□□□□ 0.79
SPAST-204ENST00000621856 GXYLT2A0PJZ3 443 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 FFAR1O14842 300 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 CCNB2O95067 398 aa19.96■□□□□ 0.79
SPAST-204ENST00000621856 NKX2-2O95096 273 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms