RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 ROPN1Q9HAT0 212 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-229ENST00000621747 LRTM1Q9HBL6 345 aa23.02■■□□□ 1.28
VEGFA-229ENST00000621747 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
VEGFA-229ENST00000621747 LGALS13Q9UHV8 139 aa23.02■■□□□ 1.28
VEGFA-229ENST00000621747 FIS1Q9Y3D6 152 aa23.02■■□□□ 1.28
VEGFA-229ENST00000621747 CCL27Q9Y4X3 112 aa23.02■■□□□ 1.28
VEGFA-229ENST00000621747 NPIPB8E9PQR5 432 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 NEFHP12036 1026 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 IGFBP2P18065 325 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 GCKP35557 465 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 ADH7P40394 386 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 ZNF155Q12901 538 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-229ENST00000621747 EIPR1Q53HC9 387 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 NPSR1Q6W5P4 371 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 RNF165Q6ZSG1 346 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 SLC44A2Q8IWA5 706 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-229ENST00000621747 DTNBP1Q96EV8 351 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 LURAP1Q96LR2 239 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 FAM111AQ96PZ2 611 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 ADOQ96SZ5 270 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 NPDC1Q9NQX5 325 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-229ENST00000621747 MAPRE3Q9UPY8 281 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 EXO1Q9UQ84 846 aaKnown RBP23.01■■□□□ 1.27
VEGFA-229ENST00000621747 SLC6A5Q9Y345 797 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 OR10H1Q9Y4A9 318 aa23.01■■□□□ 1.27
VEGFA-229ENST00000621747 C2orf72A6NCS6 295 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 TSPAN2O60636 221 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 CBR3O75828 277 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 MC3RP41968 323 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 MRPS22P82650 360 aaKnown RBP23■■□□□ 1.27
VEGFA-229ENST00000621747 KIAA0040Q15053 153 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 PRSS53Q2L4Q9 553 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 WIPI1Q5MNZ9 446 aaPredicted RBP23■■□□□ 1.27
VEGFA-229ENST00000621747 VASNQ6EMK4 673 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 TMEM107Q6UX40 140 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 LARP4Q71RC2 724 aaKnown RBP eCLIP23■■□□□ 1.271e-25■□□□□ 10.3
VEGFA-229ENST00000621747 FAM83FQ8NEG4 500 aaPredicted RBP23■■□□□ 1.27
VEGFA-229ENST00000621747 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
VEGFA-229ENST00000621747 PRDM14Q9GZV8 571 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 GLIPR2Q9H4G4 154 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 C19orf53Q9UNZ5 99 aaPredicted RBP23■■□□□ 1.27
VEGFA-229ENST00000621747 PTGDR2Q9Y5Y4 395 aa23■■□□□ 1.27
VEGFA-229ENST00000621747 HSPB2A8KAH6 182 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 PLOD2O00469 737 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 NPHS1O60500 1241 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 NME6O75414 186 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-229ENST00000621747 ALDH3A1P30838 453 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 PNLIPRP2P54317 469 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 HSPB2Q16082 182 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 SLC25A35Q3KQZ1 300 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 ACSF3Q4G176 576 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-229ENST00000621747 WDR93Q6P2C0 686 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 CLYBLQ8N0X4 340 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 ABTB1Q969K4 478 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-229ENST00000621747 AMDHD1Q96NU7 426 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 UGT2B28Q9BY64 529 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 EML4Q9HC35 981 aaKnown RBP22.99■■□□□ 1.27
VEGFA-229ENST00000621747 SERHLQ9NQF3 203 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 DDX18Q9NVP1 670 aaKnown RBP22.99■■□□□ 1.27
VEGFA-229ENST00000621747 CAMK2AQ9UQM7 478 aa22.99■■□□□ 1.27
VEGFA-229ENST00000621747 SLU7O95391 586 aaKnown RBP22.98■■□□□ 1.27
VEGFA-229ENST00000621747 EPPINO95925 133 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 ACTL6AO96019 429 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 BMP7P18075 431 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 TLE4Q04727 773 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 KANK2Q63ZY3 851 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 Q6ZSR9 355 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 YRDCQ86U90 279 aaKnown RBP22.98■■□□□ 1.27
VEGFA-229ENST00000621747 PLCZ1Q86YW0 608 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 LACC1Q8IV20 430 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 CAVIN3Q969G5 261 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 EGLN2Q96KS0 407 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 CCT7Q99832 543 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 SLC24A3Q9HC58 644 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 WIF1Q9Y5W5 379 aa22.98■■□□□ 1.27
VEGFA-229ENST00000621747 SPAG7O75391 227 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 LINC00032P0C843 101 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 TACR1P25103 407 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 PSG6Q00889 435 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 ZNHIT3Q15649 155 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-229ENST00000621747 WDR53Q7Z5U6 358 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-229ENST00000621747 DMRTC2Q8IXT2 367 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-229ENST00000621747 OR2L13Q8N349 312 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 WDSUB1Q8N9V3 476 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 OR14L1PQ8NHC6 308 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 TCP10LQ8TDR4 215 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 EFHD2Q96C19 240 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-229ENST00000621747 ELP4Q96EB1 424 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 FCRL1Q96LA6 429 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 MECRQ9BV79 373 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 TUBB1Q9H4B7 451 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 SLC17A7Q9P2U7 560 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 TMED5Q9Y3A6 229 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 DNAJC15Q9Y5T4 150 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 ADGRG4Q8IZF6 3080 aa22.97■■□□□ 1.27
VEGFA-229ENST00000621747 CSMD1Q96PZ7 3565 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 PKDREJQ9NTG1 2253 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 UPK1AO00322 258 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 PDPK1O15530 556 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 CHRNGP07510 517 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms