RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FRMD6Q96NE9 622 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 OR52E6Q96RD3 313 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 INPP5KQ9BT40 448 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 C3orf14Q9HBI5 128 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
CBWD3-217ENST00000621474 ASF1BQ9NVP2 202 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 KLHL14Q9P2G3 628 aa13.17□□□□□ -0.3
CBWD3-217ENST00000621474 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 FAM234BA2RU67 622 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 TSPAN2O60636 221 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 UGT2B11O75310 529 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 PPM1BO75688 479 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 NKX2-2O95096 273 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 FREM3P0C091 2139 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 PTPN6P29350 595 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 LSP1P33241 339 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 NRG3P56975 720 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 PRR5P85299 388 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 LASP1Q14847 261 aaKnown RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 DUSP5Q16690 384 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 ZNF324BQ6AW86 544 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 BLOC1S3Q6QNY0 202 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 DND1Q8IYX4 353 aaKnown RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 FAM13CQ8NE31 585 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 OR5M3Q8NGP4 307 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 CPT1CQ8TCG5 803 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 PIK3R3Q92569 461 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 HGDQ93099 445 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 C5orf34Q96MH7 638 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 RILPQ96NA2 401 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 ZBTB18Q99592 522 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 CCDC167Q9P0B6 97 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 CNOT11Q9UKZ1 510 aaKnown RBP13.16□□□□□ -0.3
CBWD3-217ENST00000621474 ZNF407Q9C0G0 2248 aa13.16□□□□□ -0.3
CBWD3-217ENST00000621474 GXYLT2A0PJZ3 443 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 G3V3Y1 287 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 SLC28A2O43868 658 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 RASAL1O95294 804 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 NAGAP17050 411 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 CAPN3P20807 821 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 PIGAP37287 484 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 MAN2A2P49641 1150 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 ARFIP2P53365 341 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 STX1BP61266 288 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 TP53BP2Q13625 1128 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 SQLEQ14534 574 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 PRAMEF20Q5VT98 475 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 METTL21CQ5VZV1 264 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
CBWD3-217ENST00000621474 CDRT4Q8N9R6 151 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 NODALQ96S42 347 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 TIMMDC1Q9NPL8 285 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 KLF13Q9Y2Y9 288 aaPredicted RBP13.15□□□□□ -0.3
CBWD3-217ENST00000621474 DNAJC13O75165 2243 aa13.15□□□□□ -0.3
CBWD3-217ENST00000621474 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.31
CBWD3-217ENST00000621474 RNF103-CHMP3A0A140T963 221 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 ADAM10O14672 748 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 PEX1O43933 1283 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 CPSF4O95639 269 aaKnown RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 IGKV1D-16P01601 117 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 HOXB9P17482 250 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 NCF2P19878 526 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 SOAT1P35610 550 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 PTGDSP41222 190 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 TMED10P49755 219 aaKnown RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 MEOX1P50221 254 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 FOXO1Q12778 655 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 CDC73Q6P1J9 531 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 FBXW8Q8N3Y1 598 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 SPPL2AQ8TCT8 520 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 RNF138Q8WVD3 245 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 MOAP1Q96BY2 351 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 EFHD2Q96C19 240 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-217ENST00000621474 PANX1Q96RD7 426 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 ADOQ96SZ5 270 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 SACM1LQ9NTJ5 587 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms