RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 MAPK12P53778 367 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 GTF3C1Q12789 2109 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 ELAVL1Q15717 326 aaKnown RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 ZNF630Q2M218 657 aaPredicted RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 PIGGQ5H8A4 983 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 OR4C11Q6IEV9 310 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 FAM71E1Q6IPT2 247 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 IL20RBQ6UXL0 311 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 Q6ZPB1 254 aaPredicted RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 MDGA2Q7Z553 956 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 UBE3DQ7Z6J8 389 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 POGLUT1Q8NBL1 392 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 OR7A2PQ8NGA2 310 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 OR8J2Q8NGG1 315 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.9□□□□□ -0.02
CD40-207ENST00000620709 ASB15Q8WXK1 588 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 GTF2H4Q92759 462 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 MAPKAP1Q9BPZ7 522 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 SLC39A3Q9BRY0 314 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 OR8D2Q9GZM6 311 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 ROGDIQ9GZN7 287 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 REEP4Q9H6H4 257 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 DDX31Q9H8H2 851 aaKnown RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 TRIM45Q9H8W5 580 aaPredicted RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 CHST11Q9NPF2 352 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 TIMMDC1Q9NPL8 285 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 PRDM7Q9NQW5 492 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 HPF1Q9NWY4 346 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 FAM120CQ9NX05 1096 aaKnown RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 ATP6V1HQ9UI12 483 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 YARS2Q9Y2Z4 477 aaKnown RBP14.9□□□□□ -0.02
CD40-207ENST00000620709 SPACA6W5XKT8 324 aa14.9□□□□□ -0.02
CD40-207ENST00000620709 CYR61O00622 381 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 PDE9AO76083 593 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 TPOP07202 933 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 SLC7A2P52569 658 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 TRA2BP62995 288 aaKnown RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 PLGLB1Q02325 96 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 CAPRIN1Q14444 709 aaKnown RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 SAMD4BQ5PRF9 694 aaKnown RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 C6orf10Q5SRN2 563 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 CPTPQ5TA50 214 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 C1orf146Q5VVC0 180 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 HSDL2Q6YN16 418 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 ZNF793Q6ZN11 406 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 DOLPP1Q86YN1 238 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 ACOT4Q8N9L9 421 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 DAZLQ92904 295 aaKnown RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 CCDC124Q96CT7 223 aaKnown RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 MTERF3Q96E29 417 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 ITCHQ96J02 903 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 PHF12Q96QT6 1004 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 TBCDQ9BTW9 1192 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 DENND2DQ9H6A0 471 aaPredicted RBP14.89□□□□□ -0.03
CD40-207ENST00000620709 ATAD3AQ9NVI7 634 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 TMEM181Q9P2C4 612 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 ABCD2Q9UBJ2 740 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 CLDN16Q9Y5I7 305 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 APCP25054 2843 aa14.89□□□□□ -0.03
CD40-207ENST00000620709 A0A1B0GTH9 108 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 C17orf105B2RV13 164 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 G3V3Y1 287 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 MGRN1O60291 552 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 IL3P08700 152 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 DDX5P17844 614 aaKnown RBP14.88□□□□□ -0.03
CD40-207ENST00000620709 CPN2P22792 545 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 ME2P23368 584 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 SLC6A2P23975 617 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 ATP5A1P25705 553 aaKnown RBP14.88□□□□□ -0.03
CD40-207ENST00000620709 PTGS2P35354 604 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 PHC1P78364 1004 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 C2orf80Q0P641 193 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 PDE7AQ13946 482 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 CEACAM7Q14002 265 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 OR4F3Q6IEY1 312 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 DLEU7Q6UYE1 221 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 ZNF321PQ8N8H1 164 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 PPCDCQ96CD2 204 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 COQ8BQ96D53 544 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 CGREF1Q99674 301 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 DUSP26Q9BV47 211 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 DEFB127Q9H1M4 99 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 LYRM4Q9HD34 91 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 CSMD1Q96PZ7 3565 aa14.88□□□□□ -0.03
CD40-207ENST00000620709 A0A0A6YYD5 115 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 ERN1O75460 977 aaKnown RBP14.87□□□□□ -0.03
CD40-207ENST00000620709 OR6B1O95007 311 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 GPR143P51810 404 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 LRRC74AQ0VAA2 488 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 RIPK1Q13546 671 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 KPNB1Q14974 876 aaKnown RBP14.87□□□□□ -0.03
CD40-207ENST00000620709 SPATS1Q496A3 300 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 ANXA8L1Q5VT79 327 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 FGD2Q7Z6J4 655 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 OR4N5Q8IXE1 308 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 ARMC10Q8N2F6 343 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 MORN4Q8NDC4 146 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 VPS37AQ8NEZ2 397 aa14.87□□□□□ -0.03
CD40-207ENST00000620709 OR14A16Q8NHC5 309 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms