RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 DAZAP2Q15038 168 aaPredicted RBP20.08■□□□□ 0.81
SRRT-218ENST00000620394 FAM153CQ494X1 144 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 DCST1Q5T197 706 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 NSUN5P2Q63ZY6 315 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 ACSM2BQ68CK6 577 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 DESI1Q6ICB0 168 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 POMZP3Q6PJE2 187 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 ANGPTL8Q6UXH0 198 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 TNIP2Q8NFZ5 429 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 OR1J4Q8NGS1 313 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 APIPQ96GX9 242 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 EMCNQ9ULC0 261 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 SLC6A5Q9Y345 797 aa20.08■□□□□ 0.81
SRRT-218ENST00000620394 VPS13CQ709C8 3753 aa20.08■□□□□ 0.8
SRRT-218ENST00000620394 OR6C70A6NIJ9 312 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 GOLGA8RI6L899 631 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 GNB5O14775 395 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 ICOSLGO75144 302 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 BCAS2O75934 225 aaPredicted RBP20.07■□□□□ 0.8
SRRT-218ENST00000620394 GOSR1O95249 250 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 INHBBP09529 407 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 PYGBP11216 843 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 BMP7P18075 431 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 BMP5P22003 454 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 PSPHP78330 225 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 HMGCS1Q01581 520 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 SF3B4Q15427 424 aaKnown RBP eCLIP20.07■□□□□ 0.81e-6■■■■■ 28.5
SRRT-218ENST00000620394 EIPR1Q53HC9 387 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 Q71RC1 249 aaPredicted RBP20.07■□□□□ 0.8
SRRT-218ENST00000620394 FAM83FQ8NEG4 500 aaPredicted RBP20.07■□□□□ 0.8
SRRT-218ENST00000620394 C16orf78Q8WTQ4 265 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 RNF138Q8WVD3 245 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 SLC35A4Q96G79 324 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 WDYHV1Q96HA8 205 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 VSTM2LQ96N03 204 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 SMR3AQ99954 134 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 GALNT9Q9HCQ5 603 aa20.07■□□□□ 0.8
SRRT-218ENST00000620394 ZNF629Q9UEG4 869 aaPredicted RBP20.07■□□□□ 0.8
SRRT-218ENST00000620394 GNG14A0A1W2PPG7 69 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 CCDC151A5D8V7 595 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 MBD3L4A6NDZ8 208 aaPredicted RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 MBD3L3A6NE82 208 aaPredicted RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 PRAMEF25A6NGN4 478 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 MBD3L5A6NJ08 208 aaPredicted RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 CD8B2A6NJW9 211 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 ABCB7O75027 752 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 CT45A8P0DMV1 189 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 CT45A9P0DMV2 189 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 HEPACAMQ14CZ8 416 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 CT45A2Q5DJT8 189 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 WIPI1Q5MNZ9 446 aaPredicted RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 OR9A2Q8NGT5 310 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 MBD3L2Q8NHZ7 208 aaPredicted RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 CCDC126Q96EE4 140 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 KCNA7Q96RP8 456 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 OR2B2Q9GZK3 357 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 KLRF1Q9NZS2 232 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 DCDC2Q9UHG0 476 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 EXO1Q9UQ84 846 aaKnown RBP20.06■□□□□ 0.8
SRRT-218ENST00000620394 TIMM22Q9Y584 194 aa20.06■□□□□ 0.8
SRRT-218ENST00000620394 PLOD3O60568 738 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 GLRA3O75311 464 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 ACTL6AO96019 429 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 HEXAP06865 529 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 HOXC12P31275 282 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 ZNF136P52737 540 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 NAGLUP54802 743 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 WNT3P56703 355 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 NAA20P61599 178 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 CLEC9AQ6UXN8 241 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 ZYG11AQ6WRX3 759 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 SH2D5Q6ZV89 423 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 CCDC116Q8IYX3 515 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 WDSUB1Q8N9V3 476 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 ABTB1Q969K4 478 aaPredicted RBP20.05■□□□□ 0.8
SRRT-218ENST00000620394 TMBIM1Q969X1 311 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 EXOSC8Q96B26 276 aaKnown RBP20.05■□□□□ 0.8
SRRT-218ENST00000620394 COL21A1Q96P44 957 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 ANKRA2Q9H9E1 313 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 NEUROD4Q9HD90 331 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 PFDN4Q9NQP4 134 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 SLC35C2Q9NQQ7 365 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 GIMAP4Q9NUV9 329 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 CAMK2AQ9UQM7 478 aa20.05■□□□□ 0.8
SRRT-218ENST00000620394 TUBAL3A6NHL2 446 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 FAM171A2A8MVW0 826 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 G3V2L1 256 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 H3BQF6 201 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 UBFD1O14562 309 aaKnown RBP20.04■□□□□ 0.8
SRRT-218ENST00000620394 TSPAN2O60636 221 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 IL2RAP01589 272 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 FOXA1P55317 472 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 CORO7P57737 925 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 ZNF763Q0D2J5 394 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 TOMM20Q15388 145 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 ERCC6LQ2NKX8 1250 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 NPSR1Q6W5P4 371 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 KIF18BQ86Y91 864 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 FAM9CQ8IZT9 166 aa20.04■□□□□ 0.8
SRRT-218ENST00000620394 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms