RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PODNL1Q6PEZ8 512 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 GTF2IRD2Q86UP8 949 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SDR16C5Q8N3Y7 309 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF540Q8NDQ6 660 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PEX11GQ96HA9 241 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PRRC1Q96M27 445 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 LRIT1Q9P2V4 623 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 FTSJ1Q9UET6 329 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC13A4Q9UKG4 626 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 WDR45Q9Y484 360 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 A0A1W2PRQ8 180 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SYT5O00445 386 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 CDC123O75794 336 aaPredicted RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SEC14L2O76054 403 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 CHMP24386 653 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 DCKP27707 260 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 BNIP3Q12983 259 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 DGCR6Q14129 220 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 NDUFA9Q16795 377 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SYT16Q17RD7 645 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 TYW3Q6IPR3 259 aaKnown RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PGBD2Q6P3X8 592 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 CCDC103Q8IW40 242 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 UBALD2Q8IYN6 164 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 CLIP4Q8N3C7 705 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 METTL27Q8N6F8 245 aaPredicted RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF675Q8TD23 568 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 C12orf43Q96C57 262 aaKnown RBP16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ARHGDIGQ99819 225 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 DGCR6LQ9BY27 220 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 UCK2Q9BZX2 261 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PIGUQ9H490 435 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF226Q9NYT6 803 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC6A14Q9UN76 642 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 PLCL2Q9UPR0 1127 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 MGAT4BQ9UQ53 548 aa16.19■□□□□ 0.18
PCDHGC3-205ENST00000617641 ANKRD33BA6NCL7 494 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 TRMUO75648 421 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZBTB11O95625 1053 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 RNH1P13489 461 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 POU1F1P28069 291 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAPK10P53779 464 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 CRISP1P54107 249 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR1D5P58170 312 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 WDR45BQ5MNZ6 344 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 RHOXF1Q8NHV9 184 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 PIK3R3Q92569 461 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 MUL1Q969V5 352 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF285Q96NJ3 590 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 SDF2Q99470 211 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 PDE7BQ9NP56 450 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 REV1Q9UBZ9 1251 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 PCDHGA10Q9Y5H3 936 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 CENPVL1A0A0U1RR11 272 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 HYKKA2RU49 373 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 TGFBR3LH3BV60 316 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR10H2O60403 315 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 SOX14O95416 240 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 IGFBP1P08833 259 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ALOX5P09917 674 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC35E2P0CK97 266 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 MYF5P13349 255 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 PRKAR1BP31321 381 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 AVPR1BP47901 424 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 FNTBP49356 437 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 UGT2B15P54855 530 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 LSM11P83369 360 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 HOXC5Q00444 222 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 EMX1Q04741 257 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC13A2Q13183 592 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ERV3-1Q14264 604 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 KCNAB1Q14722 419 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 EXOSC6Q5RKV6 272 aaKnown RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 DHRS4L2Q6PKH6 230 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 P3H2Q8IVL5 708 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 CTHRC1Q96CG8 243 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 MTHFD2LQ9H903 347 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ENOPH1Q9UHY7 261 aa16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZNF443Q9Y2A4 671 aaPredicted RBP16.18■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZAR1LA6NP61 321 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 INMTO95050 263 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 MT-ND2P03891 347 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 MAP2K4P45985 399 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 TARDBPQ13148 414 aaKnown RBP eCLIP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 GPR68Q15743 365 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 SLC25A45Q8N413 288 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 CDRT4Q8N9R6 151 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 ZDHHC12Q96GR4 267 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 AHCYL2Q96HN2 611 aaKnown RBP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 SPRTNQ9H040 489 aaPredicted RBP16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 FBXO34Q9NWN3 711 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 IMPAD1Q9NX62 359 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 MUTYHQ9UIF7 546 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 OR2W5A6NFC9 320 aa16.17■□□□□ 0.18
PCDHGC3-205ENST00000617641 C19orf67A6NJJ6 358 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms