RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 ROPN1Q9HAT0 212 aaPredicted RBP23.02■■□□□ 1.28
VEGFA-227ENST00000615393 LRTM1Q9HBL6 345 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 C1orf109Q9NX04 203 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 LGALS13Q9UHV8 139 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 FIS1Q9Y3D6 152 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 CCL27Q9Y4X3 112 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 NPIPB8E9PQR5 432 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 NEFHP12036 1026 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 IGFBP2P18065 325 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 GCKP35557 465 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 ADH7P40394 386 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 ZNF155Q12901 538 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-227ENST00000615393 EIPR1Q53HC9 387 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 NPSR1Q6W5P4 371 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 RNF165Q6ZSG1 346 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 SLC44A2Q8IWA5 706 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-227ENST00000615393 DTNBP1Q96EV8 351 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 LURAP1Q96LR2 239 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 FAM111AQ96PZ2 611 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 ADOQ96SZ5 270 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 NPDC1Q9NQX5 325 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-227ENST00000615393 MAPRE3Q9UPY8 281 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 EXO1Q9UQ84 846 aaKnown RBP23.01■■□□□ 1.27
VEGFA-227ENST00000615393 SLC6A5Q9Y345 797 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 OR10H1Q9Y4A9 318 aa23.01■■□□□ 1.27
VEGFA-227ENST00000615393 C2orf72A6NCS6 295 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 TSPAN2O60636 221 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 CBR3O75828 277 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 MC3RP41968 323 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 MRPS22P82650 360 aaKnown RBP23■■□□□ 1.27
VEGFA-227ENST00000615393 KIAA0040Q15053 153 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 PRSS53Q2L4Q9 553 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 WIPI1Q5MNZ9 446 aaPredicted RBP23■■□□□ 1.27
VEGFA-227ENST00000615393 VASNQ6EMK4 673 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 TMEM107Q6UX40 140 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 LARP4Q71RC2 724 aaKnown RBP eCLIP23■■□□□ 1.271e-25■□□□□ 10.3
VEGFA-227ENST00000615393 FAM83FQ8NEG4 500 aaPredicted RBP23■■□□□ 1.27
VEGFA-227ENST00000615393 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
VEGFA-227ENST00000615393 PRDM14Q9GZV8 571 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 GLIPR2Q9H4G4 154 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 C19orf53Q9UNZ5 99 aaPredicted RBP23■■□□□ 1.27
VEGFA-227ENST00000615393 PTGDR2Q9Y5Y4 395 aa23■■□□□ 1.27
VEGFA-227ENST00000615393 HSPB2A8KAH6 182 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 PLOD2O00469 737 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 NPHS1O60500 1241 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 NME6O75414 186 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-227ENST00000615393 ALDH3A1P30838 453 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 PNLIPRP2P54317 469 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 HSPB2Q16082 182 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 SLC25A35Q3KQZ1 300 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 ACSF3Q4G176 576 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-227ENST00000615393 WDR93Q6P2C0 686 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 CLYBLQ8N0X4 340 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 ABTB1Q969K4 478 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-227ENST00000615393 AMDHD1Q96NU7 426 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 UGT2B28Q9BY64 529 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 EML4Q9HC35 981 aaKnown RBP22.99■■□□□ 1.27
VEGFA-227ENST00000615393 SERHLQ9NQF3 203 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 DDX18Q9NVP1 670 aaKnown RBP22.99■■□□□ 1.27
VEGFA-227ENST00000615393 CAMK2AQ9UQM7 478 aa22.99■■□□□ 1.27
VEGFA-227ENST00000615393 SLU7O95391 586 aaKnown RBP22.98■■□□□ 1.27
VEGFA-227ENST00000615393 EPPINO95925 133 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 ACTL6AO96019 429 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 BMP7P18075 431 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 TLE4Q04727 773 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 KANK2Q63ZY3 851 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 Q6ZSR9 355 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 YRDCQ86U90 279 aaKnown RBP22.98■■□□□ 1.27
VEGFA-227ENST00000615393 PLCZ1Q86YW0 608 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 LACC1Q8IV20 430 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 CAVIN3Q969G5 261 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 EGLN2Q96KS0 407 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 CCT7Q99832 543 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 SLC24A3Q9HC58 644 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 WIF1Q9Y5W5 379 aa22.98■■□□□ 1.27
VEGFA-227ENST00000615393 SPAG7O75391 227 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 LINC00032P0C843 101 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 TACR1P25103 407 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 PSG6Q00889 435 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 ZNHIT3Q15649 155 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-227ENST00000615393 WDR53Q7Z5U6 358 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-227ENST00000615393 DMRTC2Q8IXT2 367 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-227ENST00000615393 OR2L13Q8N349 312 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 WDSUB1Q8N9V3 476 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 OR14L1PQ8NHC6 308 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 TCP10LQ8TDR4 215 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 EFHD2Q96C19 240 aaPredicted RBP22.97■■□□□ 1.27
VEGFA-227ENST00000615393 ELP4Q96EB1 424 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 FCRL1Q96LA6 429 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 MECRQ9BV79 373 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 TUBB1Q9H4B7 451 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 SLC17A7Q9P2U7 560 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 TMED5Q9Y3A6 229 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 DNAJC15Q9Y5T4 150 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 ADGRG4Q8IZF6 3080 aa22.97■■□□□ 1.27
VEGFA-227ENST00000615393 CSMD1Q96PZ7 3565 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 PKDREJQ9NTG1 2253 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 UPK1AO00322 258 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 PDPK1O15530 556 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 CHRNGP07510 517 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms