RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IL1RAPQ9NPH3 570 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 VNN3Q9NY84 501 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 MBD2Q9UBB5 411 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 PPT2Q9UMR5 302 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 SAMD4AQ9UPU9 718 aaKnown RBP12.33□□□□□ -0.43
FOXN3-219ENST00000615335 LIPT1Q9Y234 373 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 PLEKHM1Q9Y4G2 1056 aa12.33□□□□□ -0.43
FOXN3-219ENST00000615335 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 RFXANKO14593 260 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 TNFRSF10CO14798 259 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 CCNDBP1O95273 360 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ZNF682O95780 498 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 HOXB9P17482 250 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ITPKAP23677 461 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 MAGEA2P43356 314 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ZNF658BQ4V348 819 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 FAM83HQ6ZRV2 1179 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 AHSA2Q719I0 299 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 LRRC70Q7Z2Q7 622 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 GHDCQ8N2G8 530 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 OXR1Q8N573 874 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 DNASE2BQ8WZ79 361 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 COQ8BQ96D53 544 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 CMTM7Q96FZ5 175 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 OR2M4Q96R27 311 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 SEC22CQ9BRL7 303 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
FOXN3-219ENST00000615335 LAMA1P25391 3075 aa12.33□□□□□ -0.44
FOXN3-219ENST00000615335 ABCD4O14678 606 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 SSX5O60225 188 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 LRATO95237 230 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 RASGRP1O95267 797 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 B3GALT4O96024 378 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 WNT1P04628 370 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 SDC1P18827 310 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 TACR1P25103 407 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 PTPN6P29350 595 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 KIR2DL3P43628 341 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 LTB4RQ15722 352 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 ZNF79Q15937 498 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 ALG11Q2TAA5 492 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 ZNF542PQ5EBM4 170 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 LYSMD4Q5XG99 296 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 MZT2BQ6NZ67 158 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 UBE2R2Q712K3 238 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CYP4Z2PQ8N1L4 340 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 TIMM29Q9BSF4 260 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 RIBC2Q9H4K1 309 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 KCNE1BA0A087WTH5 132 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 MPC1LP0DKB6 136 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CLCNKAP51800 687 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 FZD2Q14332 565 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 GGTA1PQ4G0N0 100 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 METRNLQ641Q3 311 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 LAIR1Q6GTX8 287 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 OR2T5Q6IEZ7 315 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CEP68Q76N32 757 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 IQCHQ86VS3 1027 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CYP4Z1Q86W10 505 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CLRN3Q8NCR9 226 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 OR2T29Q8NH02 315 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 TEX47Q8TBZ9 253 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 NELL1Q92832 810 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 ATOH1Q92858 354 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-219ENST00000615335 KIAA1143Q96AT1 154 aaPredicted RBP12.32□□□□□ -0.44
FOXN3-219ENST00000615335 SGK3Q96BR1 496 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 TBC1D20Q96BZ9 403 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 CHCHD6Q9BRQ6 235 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 COPS4Q9BT78 406 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 PIGUQ9H490 435 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 LYARQ9NX58 379 aaKnown RBP12.32□□□□□ -0.44
FOXN3-219ENST00000615335 ADAM30Q9UKF2 790 aa12.32□□□□□ -0.44
FOXN3-219ENST00000615335 A0A1W2PR77 199 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 hCG_1807616A0A1W2PRN6 198 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 MYO1GB0I1T2 1018 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 TLR4O00206 839 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 KIAA0513O60268 411 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 TNFP01375 233 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 CDK1P06493 297 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
FOXN3-219ENST00000615335 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 PRPH2P23942 346 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 CSNK1EP49674 416 aaKnown RBP12.31□□□□□ -0.44
FOXN3-219ENST00000615335 SIM2Q14190 667 aaPredicted RBP12.31□□□□□ -0.44
FOXN3-219ENST00000615335 PDZK1Q5T2W1 519 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 PMS2CLQ68D20 193 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 OR4F3Q6IEY1 312 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 LRFN4Q6PJG9 635 aa12.31□□□□□ -0.44
FOXN3-219ENST00000615335 MSANTD1Q6ZTZ1 278 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms