RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 WIPI1Q5MNZ9 446 aaPredicted RBP5.21□□□□□ -1.57
CPNE3-208ENST00000614678 RTL6Q6ICC9 239 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 SLC29A4Q7RTT9 530 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 CD163Q86VB7 1156 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 OR4C3Q8NH37 302 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 NUBPLQ8TB37 319 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 PAQR8Q8TEZ7 354 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 VPS33AQ96AX1 596 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 ZG16BQ96DA0 208 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 INPP5KQ9BT40 448 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 DOHHQ9BU89 302 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 SERHLQ9NQF3 203 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 AGPAT4Q9NRZ5 378 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 GIN1Q9NXP7 522 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 STK38LQ9Y2H1 464 aa5.21□□□□□ -1.57
CPNE3-208ENST00000614678 GPR55Q9Y2T6 319 aaPredicted RBP5.21□□□□□ -1.57
CPNE3-208ENST00000614678 OIP5O43482 229 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RGS14O43566 566 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SNNO75324 88 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ERN1O75460 977 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TPOP07202 933 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ACP2P11117 423 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 HSD3B1P14060 373 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 HSD3B2P26439 372 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ZFP36L2P47974 494 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 OCRLQ01968 901 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PLGLB1Q02325 96 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 HEPACAMQ14CZ8 416 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 DUSP5Q16690 384 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 HHATQ5VTY9 493 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RPUSD3Q6P087 351 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 LRIG3Q6UXM1 1119 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 DNAJC14Q6Y2X3 702 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TRILQ7L0X0 811 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 MARCH3Q86UD3 253 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ATCAYQ86WG3 371 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RIMKLAQ8IXN7 391 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 C10orf111Q8N326 155 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PNPT1Q8TCS8 783 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF75CPQ92670 426 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 HGDQ93099 445 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TMEM125Q96AQ2 219 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 QRSL1Q9H0R6 528 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PPCSQ9HAB8 311 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SENP1Q9P0U3 644 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 GOLGA6L10A6NI86 522 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 CLDN24A6NM45 220 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 H3BQF6 201 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 REM1O75628 298 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 GLSO94925 669 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 CYC1P08574 325 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 EDN3P14138 238 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 GABRA3P34903 492 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RPL14P50914 215 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 LASP1Q14847 261 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RPS6KA2Q15349 733 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TOMM20Q15388 145 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 NTRK2Q16620 822 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ATP6AP1LQ52LC2 224 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SPANXN4Q5MJ08 99 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SLC22A10Q63ZE4 541 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SEM1Q6ZVN7 128 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 LARP4Q71RC2 724 aaKnown RBP eCLIP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 LIX1LQ8IVB5 337 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 NAXEQ8NCW5 288 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 FAM120BQ96EK7 910 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RMND5BQ96G75 393 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 AURKBQ96GD4 344 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 RSPO3Q9BXY4 272 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 REEP4Q9H6H4 257 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF703Q9H7S9 590 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SLAMF8Q9P0V8 285 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ABI3Q9P2A4 366 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ALPK2Q86TB3 2170 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SERTM1A2A2V5 107 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 NKX2-6A6NCS4 301 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SCAMP2O15127 329 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SCN2BO60939 215 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TRAPPC6AO75865 159 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TOXO94900 526 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 IL11P20809 199 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PRPH2P23942 346 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 GYS2P54840 703 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PLCXD2Q0VAA5 305 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF155Q12901 538 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PDE7AQ13946 482 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 TMEM178AQ8NBL3 297 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 JADE3Q92613 823 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PPCDCQ96CD2 204 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 VPS50Q96JG6 964 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 LCORQ96JN0 433 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 FAIM2Q9BWQ8 316 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 MANSC1Q9H8J5 431 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 MED11Q9P086 117 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 PLEKHB1Q9UF11 243 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 FAM215AQ9Y5M1 114 aa5.21□□□□□ -1.58
CPNE3-208ENST00000614678 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.21□□□□□ -1.58
CPNE3-208ENST00000614678 WIPF3A6NGB9 483 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms