RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CCDC116Q8IYX3 515 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 SMPDL3BQ92485 455 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 CNRIP1Q96F85 164 aaPredicted RBP16.2■□□□□ 0.18
SMN2-213ENST00000614240 UCN2Q96RP3 112 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 MRPL57Q9BQC6 102 aaKnown RBP16.2■□□□□ 0.18
SMN2-213ENST00000614240 ZNF395Q9H8N7 513 aaPredicted RBP16.2■□□□□ 0.18
SMN2-213ENST00000614240 NINJ2Q9NZG7 142 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 CLCF1Q9UBD9 225 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 FBXL2Q9UKC9 423 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 GPR55Q9Y2T6 319 aaPredicted RBP16.2■□□□□ 0.18
SMN2-213ENST00000614240 WIF1Q9Y5W5 379 aa16.2■□□□□ 0.18
SMN2-213ENST00000614240 NIPBLQ6KC79 2804 aaeCLIP16.2■□□□□ 0.18
SMN2-213ENST00000614240 A0A1B0GTL3 188 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 A8MXE2 369 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 PPP6CO00743 305 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 RPS17P08708 135 aaKnown RBP16.19■□□□□ 0.18
SMN2-213ENST00000614240 COL6A2P12110 1019 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 SERPINB9P50453 376 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 LHX2P50458 406 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 TEX35Q5T0J7 233 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 LETMD1Q6P1Q0 360 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 CLEC9AQ6UXN8 241 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 LARP4Q71RC2 724 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMN2-213ENST00000614240 ADGRE4PQ86SQ3 457 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 CNEP1R1Q8N9A8 125 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 OR4K17Q8NGC6 315 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 ZNF483Q8TF39 744 aaPredicted RBP16.19■□□□□ 0.18
SMN2-213ENST00000614240 KAT2AQ92830 837 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 ZNF681Q96N22 645 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 FAM111AQ96PZ2 611 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 HBEGFQ99075 208 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 G6PC3Q9BUM1 346 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 MRPL46Q9H2W6 279 aaKnown RBP16.19■□□□□ 0.18
SMN2-213ENST00000614240 GIMAP4Q9NUV9 329 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 SENP1Q9P0U3 644 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 VPS29Q9UBQ0 182 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 DLGAP4Q9Y2H0 992 aa16.19■□□□□ 0.18
SMN2-213ENST00000614240 FLNAP21333 2647 aaKnown RBP16.18■□□□□ 0.18
SMN2-213ENST00000614240 DOCK7Q96N67 2140 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 A0A1W2PNV4 684 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 OR4F21O95013 312 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 KRT6AP02538 564 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 KRT6BP04259 564 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 ZNF708P17019 499 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 GRK2P25098 689 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 DPP4P27487 766 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 KRT6CP48668 564 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 CLDN18P56856 261 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 CORO7P57737 925 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 MRPS22P82650 360 aaKnown RBP16.18■□□□□ 0.18
SMN2-213ENST00000614240 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 SAMD14Q8IZD0 417 aaPredicted RBP16.18■□□□□ 0.18
SMN2-213ENST00000614240 ZNF675Q8TD23 568 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 EXOSC8Q96B26 276 aaKnown RBP16.18■□□□□ 0.18
SMN2-213ENST00000614240 SLC35A4Q96G79 324 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 BTBD9Q96Q07 612 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 ANKRA2Q9H9E1 313 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 ZDHHC18Q9NUE0 388 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 TRPS1Q9UHF7 1281 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 OR10H1Q9Y4A9 318 aa16.18■□□□□ 0.18
SMN2-213ENST00000614240 MED12Q93074 2177 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 ABCA2Q9BZC7 2435 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 GNG14A0A1W2PPG7 69 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 A0A1W2PPR1 153 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 MANBAO00462 879 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 MSTNO14793 375 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 SMPD2O60906 423 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 NME6O75414 186 aaPredicted RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 TGM6O95932 706 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 MAGEA12P43365 314 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 PSPHP78330 225 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 FAM27E3Q08E93 113 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 ZNF628Q5EBL2 1059 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 UBAP2Q5T6F2 1119 aaKnown RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 OR2A2Q6IF42 318 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 UBQLNLQ8IYU4 475 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 CDYL2Q8N8U2 506 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 GBP7Q8N8V2 638 aaPredicted RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 OR9A2Q8NGT5 310 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 ERP27Q96DN0 273 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 PAFAH2Q99487 392 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 ZNF226Q9NYT6 803 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 C6orf203Q9P0P8 240 aaPredicted RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 PPP4R1LQ9P1A2 415 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 MCM8Q9UJA3 840 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 MRPS18CQ9Y3D5 142 aaKnown RBP16.17■□□□□ 0.18
SMN2-213ENST00000614240 TESMINQ9Y4I5 508 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 EXPH5Q8NEV8 1989 aa16.17■□□□□ 0.18
SMN2-213ENST00000614240 HRNRQ86YZ3 2850 aaPredicted RBP16.16■□□□□ 0.18
SMN2-213ENST00000614240 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 SLC22A20A6NK97 555 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 A8MT66 165 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 FAM171A2A8MVW0 826 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 POC1B-GALNT4F8VUJ3 575 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 PCDH7O60245 1069 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 TNFSF13O75888 250 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 CRHP06850 196 aa16.16■□□□□ 0.18
SMN2-213ENST00000614240 IL3P08700 152 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms