RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 SACM1LQ9NTJ5 587 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CNIH4Q9P003 139 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 LUZP4Q9P127 313 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PCDHGB3Q9Y5G1 929 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 KLRC4-KLRK1H3BQV0 150 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 HS6ST1O60243 411 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 ZNF354AO60765 605 aaPredicted RBP12.22□□□□□ -0.45
MDC1-209ENST00000613547 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
MDC1-209ENST00000613547 REM1O75628 298 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 NKX2-2O95096 273 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 RASAL1O95294 804 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 GABRA3P34903 492 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 TRPC1P48995 793 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 PSG6Q00889 435 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 EFR3AQ14156 821 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 LASP1Q14847 261 aaKnown RBP12.22□□□□□ -0.45
MDC1-209ENST00000613547 NTRK2Q16620 822 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 SLC22A10Q63ZE4 541 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 FAM180AQ6UWF9 173 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 LYPD8Q6UX82 237 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 NPSR1Q6W5P4 371 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 ZNF621Q6ZSS3 439 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 NUP54Q7Z3B4 507 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 MDGA2Q7Z553 956 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 COX18Q8N8Q8 333 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 GOT1L1Q8NHS2 421 aaPredicted RBP12.22□□□□□ -0.45
MDC1-209ENST00000613547 FBXO30Q8TB52 745 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 C10orf82Q8WW14 230 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 VPS33AQ96AX1 596 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 TMCO6Q96DC7 493 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 OMA1Q96E52 524 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 SPDL1Q96EA4 605 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 GIMAP5Q96F15 307 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 SECISBP2Q96T21 854 aaKnown RBP12.22□□□□□ -0.45
MDC1-209ENST00000613547 SLC35A5Q9BS91 424 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 AGPAT4Q9NRZ5 378 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 FAM53CQ9NYF3 392 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 MAP10Q9P2G4 905 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 CBLCQ9ULV8 474 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 ATMQ13315 3056 aa12.22□□□□□ -0.45
MDC1-209ENST00000613547 DOCK10Q96BY6 2186 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 A0A1W2PP18 115 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 DUXAA6NLW8 204 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 ANGPT2O15123 496 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 SLC22A2O15244 555 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 SUV39H1O43463 412 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 CCDC22O60826 627 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 AGR2O95994 175 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 CRYABP02511 175 aaKnown RBP12.21□□□□□ -0.45
MDC1-209ENST00000613547 DRD4P21917 467 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 PIGAP37287 484 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 ZFP36L2P47974 494 aaKnown RBP12.21□□□□□ -0.45
MDC1-209ENST00000613547 PNLIPRP2P54317 469 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 FBXW4P57775 412 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 TXNL4AP83876 142 aaKnown RBP12.21□□□□□ -0.45
MDC1-209ENST00000613547 GAB1Q13480 694 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 MAPRE2Q15555 327 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 COLEC12Q5KU26 742 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 TBCELQ5QJ74 424 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 CDC73Q6P1J9 531 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 ANGPTL8Q6UXH0 198 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 GK5Q6ZS86 529 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 PRICKLE2Q7Z3G6 844 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 C6orf120Q7Z4R8 191 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
MDC1-209ENST00000613547 ZNF227Q86WZ6 799 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 FUNDC1Q8IVP5 155 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 FBXW8Q8N3Y1 598 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 Q8NA96 180 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 POGLUT1Q8NBL1 392 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 SLC16A11Q8NCK7 471 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 OR10G3Q8NGC4 313 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 OR5M3Q8NGP4 307 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 PAQR8Q8TEZ7 354 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 TSPEARQ8WU66 669 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 DIO2Q92813 273 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 TMBIM1Q969X1 311 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 SLC35G5Q96KT7 338 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 COL21A1Q96P44 957 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 STACQ99469 402 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 YIPF4Q9BSR8 244 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 INPP5KQ9BT40 448 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 PIGUQ9H490 435 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 ZNF385DQ9H6B1 395 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 GPATCH2Q9NW75 528 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 GIN1Q9NXP7 522 aa12.21□□□□□ -0.45
MDC1-209ENST00000613547 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 PEX1O43933 1283 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 SNX3O60493 162 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 KRT75O95678 551 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 SNRPB2P08579 225 aaKnown RBP12.2□□□□□ -0.46
MDC1-209ENST00000613547 ZCCHC18P0CG32 403 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 CCL3P10147 92 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 ACP2P11117 423 aa12.2□□□□□ -0.46
MDC1-209ENST00000613547 CNR1P21554 472 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms