RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GLB1L2Q8IW92 636 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 AKR7LQ8NHP1 331 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 C1GALT1Q9NS00 363 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 MRC1P22897 1456 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 DOCK9Q9BZ29 2069 aa8.37□□□□□ -1.07
TTC28-208ENST00000612946 SCN11AQ9UI33 1791 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 HOXC12P31275 282 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 TNK1Q13470 666 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 MADCAM1Q13477 382 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 GIMAP1Q8WWP7 306 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 FDXACB1Q9BRP7 624 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 OR6C2Q9NZP2 312 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 STRAPQ9Y3F4 350 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 NRCAMQ92823 1304 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 RAP1AP62834 184 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 LILRB2Q8N423 598 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 HORMAD2Q8N7B1 307 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 NLGN2Q8NFZ4 835 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PTGES2Q9H7Z7 377 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 FBXW11Q9UKB1 542 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ELOA3CA0A087WX78 387 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 K7EPK0 472 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 GRM6O15303 877 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 NUPL2O15504 423 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 LRRC37A3O60309 1634 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 TDRD6O60522 2096 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 MAFKO60675 156 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 C4BPAP04003 597 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 KIAA0141Q14154 515 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 KDM8Q8N371 416 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 FAM71E2Q8N5Q1 922 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ARMC5Q96C12 935 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PGLYRP2Q96PD5 576 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PHPT1Q9NRX4 125 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 UBIAD1Q9Y5Z9 338 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 CTHP32929 405 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PAFAH1B3Q15102 231 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 MIR1-1HGQ9H1L0 117 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 KCNS2Q9ULS6 477 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 TRIP12Q14669 1992 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 CBY3A6NI87 242 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SPATA31D3P0C874 917 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 HTR2CP28335 458 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 MC1RQ01726 317 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZNF704Q6ZNC4 412 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 SPATA31D4Q6ZUB0 917 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 CHST9Q7L1S5 443 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 GOLGA7Q7Z5G4 137 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZMIZ2Q8NF64 920 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 OR9I1Q8NGQ6 314 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 EPHA6Q9UF33 1036 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 H3BRB1 525 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 POLR2HP52434 150 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 SLC7A9P82251 487 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 LAS2Q8IYD9 372 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 OR5B17Q8NGF7 314 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 MRIQ9BWK5 157 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 DPEP3Q9H4B8 488 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 ACP6Q9NPH0 428 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 NCDNQ9UBB6 729 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 TNS2Q63HR2 1409 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PIK3C2AO00443 1686 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 LRIT2A6NDA9 550 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 KDELR2P33947 212 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SULT1A2P50226 295 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 CLDN8P56748 225 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SEC61A1P61619 476 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 AHCYL2Q96HN2 611 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 FERD3LQ96RJ6 166 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 IL12RB2Q99665 862 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 NMNAT1Q9HAN9 279 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 SEMA4GQ9NTN9 838 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 KLK14Q9P0G3 267 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZNF223Q9UK11 482 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 POU2F3Q9UKI9 436 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 CAMK2AQ9UQM7 478 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 PYCR1P32322 319 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZNF84P51523 738 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ARHGAP19Q14CB8 494 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SPANXN4Q5MJ08 99 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 FAM205BPQ63HN1 556 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 VASH1Q7L8A9 365 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 STEAP2Q8NFT2 490 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 APH1BQ8WW43 257 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 MTERF1Q99551 399 aaKnown RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 PLEKHA3Q9HB20 300 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 C1orf123Q9NWV4 160 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SYT7O43581 403 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 BDNFP23560 247 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 NKX3-2P78367 333 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SLC18B1Q6NT16 456 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 SYT13Q7L8C5 426 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 C22orf15Q8WYQ4 148 aa8.36□□□□□ -1.07
TTC28-208ENST00000612946 ZNF668Q96K58 619 aaPredicted RBP8.36□□□□□ -1.07
TTC28-208ENST00000612946 FHP07954 510 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms