RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 GSTT2P0CG29 244 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GSTT2BP0CG30 244 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 C5AR1P21730 350 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 F8A1P23610 371 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GZMMP51124 257 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 CHRNEQ04844 493 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GBX1Q14549 363 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GPNMBQ14956 572 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 GPR19Q15760 415 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 NDUFAF6Q330K2 333 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 AGAP6Q5VW22 663 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SLX4IPQ5VYV7 408 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 TMEM215Q68D42 235 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 C11orf88Q6PI97 169 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 POMZP3Q6PJE2 187 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 FRRS1Q6ZNA5 592 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 LAX1Q8IWV1 398 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SLC41A3Q96GZ6 507 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 AGAP4Q96P64 663 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 SYNDIG1Q9H7V2 258 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 ZC4H2Q9NQZ6 224 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 PAQR5Q9NXK6 330 aaPredicted RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 MRPL39Q9NYK5 338 aaKnown RBP8.19□□□□□ -1.1
LIG4-204ENST00000611712 OSGIN1Q9UJX0 560 aa8.19□□□□□ -1.1
LIG4-204ENST00000611712 CLDN4O14493 209 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GMFGO60234 142 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 KHDRBS3O75525 346 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 REM1O75628 298 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 MT-ND5P03915 603 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ITPKBP27987 946 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GABRA3P34903 492 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 HOXD12P35452 270 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ANGPT1Q15389 498 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ZNF750Q32MQ0 723 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 FAM78AQ5JUQ0 283 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 TCTN3Q6NUS6 607 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PGBD2Q6P3X8 592 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GID4Q8IVV7 300 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 CELF2-AS1Q8N7Q2 184 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SAMD12Q8N8I0 201 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 FBXO15Q8NCQ5 510 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 TANKQ92844 425 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 COQ10AQ96MF6 247 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SAMD11Q96NU1 681 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 AMDHD1Q96NU7 426 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 MTHFD2LQ9H903 347 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 ZNF638Q14966 1978 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 C2orf92A0A1B0GVN3 265 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 UNC119BA6NIH7 251 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ZAR1LA6NP61 321 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 TMPRSS11DO60235 418 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 CSO75390 466 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 C4BPBP20851 252 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 RPS19P39019 145 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 TRA2BP62995 288 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 RAB40BQ12829 278 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 IRF4Q15306 451 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PIP5KL1Q5T9C9 394 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 CAMKMTQ7Z624 323 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 LACC1Q8IV20 430 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GDPD1Q8N9F7 314 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ASCC1Q8N9N2 400 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 OR8H1Q8NGG4 311 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GRPEL2Q8TAA5 225 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ZNF486Q96H40 463 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 OR7D2Q96RA2 312 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PITHD1Q9GZP4 211 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 SLC28A3Q9HAS3 691 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 MKKSQ9NPJ1 570 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 ENAMQ9NRM1 1142 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 NLKQ9UBE8 527 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SATB2Q9UPW6 733 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 FAM183AA6NL82 134 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 M0R082 166 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ADAM23O75077 832 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 CBLP22681 906 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 MMP11P24347 488 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PYCR1P32322 319 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 STAT5AP42229 794 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 GBX2P52951 348 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 CAV3P56539 151 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 REEP5Q00765 189 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 XKRXQ6PP77 449 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 OAFQ86UD1 273 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SLC37A3Q8NCC5 494 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 ZNF563Q8TA94 476 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 EFHD2Q96C19 240 aaPredicted RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 CDADC1Q9BWV3 514 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 RBCK1Q9BYM8 510 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 OR2B2Q9GZK3 357 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PRSS16Q9NQE7 514 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 SLC23A2Q9UGH3 650 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 NUFIP1Q9UHK0 495 aaKnown RBP8.18□□□□□ -1.1
LIG4-204ENST00000611712 ADAM29Q9UKF5 820 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 PIKFYVEQ9Y2I7 2098 aa8.18□□□□□ -1.1
LIG4-204ENST00000611712 OR6C74A6NCV1 312 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms