RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 J3QRK9 145 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TP53P04637 393 aaPredicted RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 HSMCR30P0CW71 290 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CLK1P49759 484 aaKnown RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 HOXC5Q00444 222 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 RELAQ04206 551 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 COX10Q12887 443 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 DEFB110Q30KQ9 67 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 ARMC6Q6NXE6 501 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 C16orf87Q6PH81 154 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 SYT13Q7L8C5 426 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 PARGQ86W56 976 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 MEX3DQ86XN8 651 aaKnown RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 LINC00471Q8N535 108 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 ZDHHC1Q8WTX9 485 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 KLHDC7BQ96G42 594 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 SLC6A18Q96N87 628 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 GAS2L1Q99501 681 aaPredicted RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 GPA33Q99795 319 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 ADAP2Q9NPF8 381 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CNOT2Q9NZN8 540 aaKnown RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 PTGFRNQ9P2B2 879 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CHST2Q9Y4C5 530 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 ANKRD33BA6NCL7 494 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 MBTPS2O43462 519 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 HCRTR1O43613 425 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 AIREO43918 545 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 FGF17O60258 216 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CNOT3O75175 753 aaKnown RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 NADKO95544 446 aaPredicted RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 AGR2O95994 175 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CCNYL3P0C7X3 344 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CHRNB1P11230 501 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 BLKP51451 505 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 SNRPGP62308 76 aaKnown RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 DUSP5Q16690 384 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 DGUOKQ16854 277 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 C12orf73Q69YU5 71 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 C1orf94Q6P1W5 598 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 FRRS1Q6ZNA5 592 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 CLIP4Q8N3C7 705 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TMEM52Q8NDY8 209 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 PLEKHA8Q96JA3 519 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 Q96MT0 163 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TTYH1Q9H313 450 aaPredicted RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 TRIM45Q9H8W5 580 aaPredicted RBP12.74□□□□□ -0.37
NEK3-205ENST00000610828 GPR27Q9NS67 375 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 TVP23BQ9NYZ1 205 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 NDOR1Q9UHB4 597 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
NEK3-205ENST00000610828 A0A087WUU8 490 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 CYP7B1O75881 506 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ADRA2AP08913 450 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 SRFP11831 508 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 NT5EP21589 574 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 PRKAR1BP31321 381 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 OPRL1P41146 370 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 RGS8P57771 180 aaPredicted RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 TMED1Q13445 227 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 MED22Q15528 200 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 NDUFA9Q16795 377 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ZNF628Q5EBL2 1059 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ARMCX4Q5H9R4 360 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 DYNC2LI1Q8TCX1 351 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ZHX1-C8orf76Q96EF9 292 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 LRRC61Q9BV99 259 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ALOXE3Q9BYJ1 711 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ZBTB20Q9HC78 741 aaPredicted RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 SEMA4GQ9NTN9 838 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 CORINQ9Y5Q5 1042 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 SGK494L7N484 410 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 GALR3O60755 368 aaPredicted RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 ACP2P11117 423 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 ST6GAL1P15907 406 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 GADD45AP24522 165 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 BMP8BP34820 402 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 SOX18P35713 384 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 IRF3Q14653 427 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 PUS10Q3MIT2 529 aaKnown RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 MANEAQ5SRI9 462 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 TYW3Q6IPR3 259 aaKnown RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 CD300LDQ6UXZ3 194 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 BCDIN3DQ7Z5W3 292 aaKnown RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 OR8J1Q8NGP2 316 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 FNDC8Q8TC99 324 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
NEK3-205ENST00000610828 CRELD1Q96HD1 420 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 CDCA4Q9BXL8 241 aa12.73□□□□□ -0.37
NEK3-205ENST00000610828 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms