RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZDHHC5Q9C0B5 715 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 C6orf106Q9H6K1 298 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 P2RX2Q9UBL9 471 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 SERTM1A2A2V5 107 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 FOXE1O00358 373 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF780AO75290 641 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 TRIM23P36406 574 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 CLCNKAP51800 687 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 SMSP52788 366 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 C21orf58P58505 322 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 SLC3A1Q07837 685 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 PLK5Q496M5 336 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 SLC27A4Q6P1M0 643 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 ARL9Q6T311 187 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 RPTNQ6XPR3 784 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 OR4N5Q8IXE1 308 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 SLC39A11Q8N1S5 342 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 PIGKQ92643 395 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 CCDC120Q96HB5 630 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 DIMT1Q9UNQ2 313 aaKnown RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 OR1A2Q9Y585 309 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 TRBV23OR9-2A0A075B6M9 112 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 EEF1E1O43324 174 aaKnown RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 FCMRO60667 390 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 ICMTO60725 284 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 C6P13671 934 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 CPEP16870 476 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 POU3F3P20264 500 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-216ENST00000610401 CHRNEQ04844 493 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 LTB4RQ15722 352 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 C18orf63Q68DL7 685 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 C12orf40Q86WS4 652 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 RDH10Q8IZV5 341 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 OR5P2Q8WZ92 322 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 OR51V1Q9H2C8 321 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 AHSPQ9NZD4 102 aa19.2■□□□□ 0.66
SSBP3-216ENST00000610401 INMT-MINDY4F8WBC2 141 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 GABRPO00591 440 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 PI15O43692 258 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 PIPP12273 146 aaPredicted RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 MMP12P39900 470 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 PLPP4Q5VZY2 271 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 NRMQ8IXM6 262 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 SHISA5Q8N114 240 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 CXorf40BQ96DE9 158 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF717Q9BY31 904 aaPredicted RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 NPAP1Q9NZP6 1156 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 CENPBD1B2RD01 187 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 LATS1O95835 1130 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 GYPBP06028 91 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 ARSBP15848 533 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 ELK1P19419 428 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 TRHRP34981 398 aaPredicted RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 BSGP35613 385 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 ACVR1BP36896 505 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 AGFG1P52594 562 aaKnown RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 ZNF311Q5JNZ3 666 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 METTL3Q86U44 580 aaKnown RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 IZUMO1Q8IYV9 350 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 OR8H3Q8N146 312 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 CPXM2Q8N436 756 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 SAMD12Q8N8I0 201 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 NUS1Q96E22 293 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 SGPP1Q9BX95 441 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 FZD3Q9NPG1 666 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 SEMA4GQ9NTN9 838 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 WSB2Q9NYS7 404 aaPredicted RBP19.19■□□□□ 0.66
SSBP3-216ENST00000610401 SDK1Q7Z5N4 2213 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 WDR87Q6ZQQ6 2873 aa19.19■□□□□ 0.66
SSBP3-216ENST00000610401 FRMPD3Q5JV73 1810 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 NARSO43776 548 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 SOD1P00441 154 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 RPL3P39023 403 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ID2Q02363 134 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ZSWIM7Q19AV6 140 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 MPP7Q5T2T1 576 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 CPOQ8IVL8 374 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 TBC1D19Q8N5T2 526 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 GDPD1Q8N9F7 314 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 SUN5Q8TC36 379 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 POF1BQ8WVV4 589 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 LMLNQ96KR4 655 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 F5P12259 2224 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 HIDE1A8MVS5 230 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 H3BSH0 61 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 KIAA0355O15063 1070 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 FABP7O15540 132 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ERI3O43414 337 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 PDE9AO76083 593 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 TBXA2RP21731 343 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ITGB7P26010 798 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 SLC1A3P43003 542 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ST8SIA6P61647 398 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 FNDC3BQ53EP0 1204 aaKnown RBP19.18■□□□□ 0.66
SSBP3-216ENST00000610401 CCNJQ5T5M9 372 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 FAM129CQ86XR2 697 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 OR4M1Q8NGD0 313 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 LHX9Q9NQ69 397 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 ING3Q9NXR8 418 aa19.18■□□□□ 0.66
SSBP3-216ENST00000610401 H2AFY2Q9P0M6 372 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms