RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 BSGP35613 385 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 KRT20P35900 424 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SUCLG1P53597 346 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TPD52P55327 224 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CTBP2P56545 445 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EXOSC7Q15024 291 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PPP1R7Q15435 360 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 LIPNQ5VXI9 398 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 STK32CQ86UX6 486 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ROBO4Q8WZ75 1007 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DDX31Q9H8H2 851 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NGBQ9NPG2 151 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MOCS1Q9NZB8 636 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OPTCQ9UBM4 332 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GDF2Q9UK05 429 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CHMP2BQ9UQN3 213 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PCDHGA11Q9Y5H2 935 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ABCA1O95477 2261 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 FAM234BA2RU67 622 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 LINC01387J3KSC0 135 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GBAP04062 536 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 HK1P19367 917 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 S1PR1P21453 382 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 IL12BP29460 328 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ELK3P41970 407 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NUDT6P53370 316 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 B3GALT5-AS1P59052 145 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 VLDLRP98155 873 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SLMAPQ14BN4 828 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GUSBP1Q15486 140 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR4D1Q15615 310 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NRF1Q16656 503 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PDIK1LQ8N165 341 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 LILRB1Q8NHL6 650 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TMBIM1Q969X1 311 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZNF717Q9BY31 904 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 FAIMQ9NVQ4 179 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PPP4R1LQ9P1A2 415 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PRODH2Q9UF12 536 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GPR52Q9Y2T5 361 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ANGPTL3Q9Y5C1 460 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 IGHV4-30-2A0A087WSY4 118 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GOLGA6L10A6NI86 522 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 K7EPI3 171 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SPRY1O43609 319 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PYGBP11216 843 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CD1DP15813 335 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DRD5P21918 477 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PPICP45877 212 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CLDN15P56746 228 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MGAT5Q09328 741 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EFR3AQ14156 821 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CYB5R2Q6BCY4 276 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 FAM111BQ6SJ93 734 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TSPAN17Q96FV3 270 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NSMCE4AQ9NXX6 385 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ASIC3Q9UHC3 531 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PLLPQ9Y342 182 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EXPH5Q8NEV8 1989 aa13.79□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DNALI1O14645 258 aaPredicted RBP13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 AQP8O94778 261 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DSCR9P59020 149 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 POU4F1Q01851 419 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 LOXL1Q08397 574 aaPredicted RBP13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MAP4K2Q12851 820 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ILF2Q12905 390 aaKnown RBP13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CUL3Q13618 768 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PRICKLE4Q2TBC4 344 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CTU2Q2VPK5 515 aaKnown RBP13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 STEAP2Q8NFT2 490 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TRIM58Q8NG06 486 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR52R1Q8NGF1 315 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SLC35A4Q96G79 324 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DSN1Q9H410 356 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 RHOJQ9H4E5 214 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 LZTFL1Q9NQ48 299 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SMYD2Q9NRG4 433 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MAT2BQ9NZL9 334 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CLEC4AQ9UMR7 237 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TSC22D4Q9Y3Q8 395 aa13.78□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SUPT3HB4E1H0 165 aa13.77□□□□□ -0.21
NEDD8-MDP1-204ENST00000605847 TO15178 435 aa13.77□□□□□ -0.21
NEDD8-MDP1-204ENST00000605847 PHGDHO43175 533 aaKnown RBP13.77□□□□□ -0.21
NEDD8-MDP1-204ENST00000605847 LMX1BO60663 402 aa13.77□□□□□ -0.21
NEDD8-MDP1-204ENST00000605847 SUPT3HO75486 399 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms