RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PM20D2Q8IYS1 436 aa16.54■□□□□ 0.24
CCDC12-208ENST00000603885 SLC35A4Q96G79 324 aa16.54■□□□□ 0.24
CCDC12-208ENST00000603885 LURAP1Q96LR2 239 aa16.54■□□□□ 0.24
CCDC12-208ENST00000603885 GATA5Q9BWX5 397 aaPredicted RBP16.54■□□□□ 0.24
CCDC12-208ENST00000603885 GALNT9Q9HCQ5 603 aa16.54■□□□□ 0.24
CCDC12-208ENST00000603885 NPDC1Q9NQX5 325 aaPredicted RBP16.54■□□□□ 0.24
CCDC12-208ENST00000603885 SLC6A5Q9Y345 797 aa16.54■□□□□ 0.24
CCDC12-208ENST00000603885 HCFC1P51610 2035 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 A0A087WV62 115 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 RGS14O43566 566 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 NME6O75414 186 aaPredicted RBP16.53■□□□□ 0.24
CCDC12-208ENST00000603885 CHEK2O96017 543 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 NEFHP12036 1026 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 IL12BP29460 328 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 GCKP35557 465 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 ZNF155Q12901 538 aaPredicted RBP16.53■□□□□ 0.24
CCDC12-208ENST00000603885 EFR3AQ14156 821 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 SF3B4Q15427 424 aaKnown RBP eCLIP16.53■□□□□ 0.247e-6■□□□□ 9.4
CCDC12-208ENST00000603885 EIPR1Q53HC9 387 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 NHSL2Q5HYW2 709 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 VASNQ6EMK4 673 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 NPSR1Q6W5P4 371 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 HOMEZQ8IX15 550 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 BANPQ8N9N5 519 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 ADOQ96SZ5 270 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 TIMP4Q99727 224 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 PRDM14Q9GZV8 571 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 LRTM1Q9HBL6 345 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 C1orf109Q9NX04 203 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 LGALS13Q9UHV8 139 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 MAPRE3Q9UPY8 281 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 FIS1Q9Y3D6 152 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 CCL27Q9Y4X3 112 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 PTGDR2Q9Y5Y4 395 aa16.53■□□□□ 0.24
CCDC12-208ENST00000603885 PDZD2O15018 2839 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 ARHGAP21Q5T5U3 1957 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 C2orf72A6NCS6 295 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 NPIPB8E9PQR5 432 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 TSPAN2O60636 221 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 MC3RP41968 323 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 MRPS22P82650 360 aaKnown RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 KIAA0040Q15053 153 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 PRSS53Q2L4Q9 553 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 SLC25A35Q3KQZ1 300 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 ACSF3Q4G176 576 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 WIPI1Q5MNZ9 446 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 EMBQ6PCB8 327 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 TMEM107Q6UX40 140 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 RNF165Q6ZSG1 346 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 SLC44A2Q8IWA5 706 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 CLYBLQ8N0X4 340 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 FAM83FQ8NEG4 500 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 FAM111AQ96PZ2 611 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 UGT2B28Q9BY64 529 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 ROPN1BQ9BZX4 212 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 ROPN1Q9HAT0 212 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 SERHLQ9NQF3 203 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 DDX18Q9NVP1 670 aaKnown RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 C19orf53Q9UNZ5 99 aaPredicted RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 EXO1Q9UQ84 846 aaKnown RBP16.52■□□□□ 0.24
CCDC12-208ENST00000603885 CAMK2AQ9UQM7 478 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 OR10H1Q9Y4A9 318 aa16.52■□□□□ 0.24
CCDC12-208ENST00000603885 HSPB2A8KAH6 182 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 PLOD2O00469 737 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 CBR3O75828 277 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 EPPINO95925 133 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 BMP7P18075 431 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 ALDH3A1P30838 453 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 PNLIPRP2P54317 469 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 TLE4Q04727 773 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 HSPB2Q16082 182 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 KANK2Q63ZY3 851 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 WDR53Q7Z5U6 358 aaPredicted RBP16.51■□□□□ 0.23
CCDC12-208ENST00000603885 YRDCQ86U90 279 aaKnown RBP16.51■□□□□ 0.23
CCDC12-208ENST00000603885 LACC1Q8IV20 430 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 LIX1LQ8IVB5 337 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 WDSUB1Q8N9V3 476 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 AENQ8WTP8 325 aaKnown RBP16.51■□□□□ 0.23
CCDC12-208ENST00000603885 ABTB1Q969K4 478 aaPredicted RBP16.51■□□□□ 0.23
CCDC12-208ENST00000603885 DTNBP1Q96EV8 351 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 EGLN2Q96KS0 407 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 AMDHD1Q96NU7 426 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 CCT7Q99832 543 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 GLIPR2Q9H4G4 154 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 EML4Q9HC35 981 aaKnown RBP16.51■□□□□ 0.23
CCDC12-208ENST00000603885 WIF1Q9Y5W5 379 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 POLQO75417 2590 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 OTOGQ6ZRI0 2925 aa16.51■□□□□ 0.23
CCDC12-208ENST00000603885 CSMD2Q7Z408 3487 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 NPHS1O60500 1241 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 ACTL6AO96019 429 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 TACR1P25103 407 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 PSG6Q00889 435 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 SH2D4BQ5SQS7 431 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 Q6ZSR9 355 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 SEM1Q6ZVN7 128 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 PLCZ1Q86YW0 608 aa16.5■□□□□ 0.23
CCDC12-208ENST00000603885 DMRTC2Q8IXT2 367 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms