RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 EMP2P54851 167 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CLDN6P56747 220 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 DUSP8Q13202 625 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 GRAMD1BQ3KR37 738 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 IFI44LQ53G44 452 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 OGFRL1Q5TC84 451 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 SPPL2AQ8TCT8 520 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 HOXB13Q92826 284 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 PMEPA1Q969W9 287 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 EME1Q96AY2 570 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 KLHL4Q9C0H6 718 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 RUBCNLQ9H714 662 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 TRIM45Q9H8W5 580 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 WDR54Q9H977 334 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CACYBPQ9HB71 228 aaKnown RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 CFL2Q9Y281 166 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 GPC6Q9Y625 555 aaPredicted RBP16.75■□□□□ 0.27
VRK3-225ENST00000601912 MUC6Q6W4X9 2439 aa16.75■□□□□ 0.27
VRK3-225ENST00000601912 CUL9Q8IWT3 2517 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 FAM149AA5PLN7 773 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 GNGT2O14610 69 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 NKX2-2O95096 273 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 ETV5P41161 510 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 MAGEA2P43356 314 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 EFNA3P52797 238 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 POU6F2P78424 691 aaPredicted RBP16.74■□□□□ 0.27
VRK3-225ENST00000601912 KCNJ10P78508 379 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 KIF26BQ2KJY2 2108 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 TMEM164Q5U3C3 297 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 LCN10Q6JVE6 187 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 MRPL14Q6P1L8 145 aaKnown RBP16.74■□□□□ 0.27
VRK3-225ENST00000601912 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 ZNF615Q8N8J6 731 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 SMYD1Q8NB12 490 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 ICA1LQ8NDH6 482 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 CHDHQ8NE62 594 aaPredicted RBP16.74■□□□□ 0.27
VRK3-225ENST00000601912 C16orf52Q8NHV5 167 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 VSTM2LQ96N03 204 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 OR8D2Q9GZM6 311 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 DNAJB9Q9UBS3 223 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 C3orf18Q9UK00 162 aa16.74■□□□□ 0.27
VRK3-225ENST00000601912 PEX1O43933 1283 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 ALOX12BO75342 701 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 SEMG1P04279 462 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 SLC5A2P31639 672 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 DCST2Q5T1A1 773 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 FAAH2Q6GMR7 532 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 WDR36Q8NI36 951 aaKnown RBP16.73■□□□□ 0.27
VRK3-225ENST00000601912 SLC2A12Q8TD20 617 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 GEMIN6Q8WXD5 167 aaKnown RBP16.73■□□□□ 0.27
VRK3-225ENST00000601912 PROX1Q92786 737 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 VPS50Q96JG6 964 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 SDF2Q99470 211 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 CRB3Q9BUF7 120 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 SLC38A1Q9H2H9 487 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 VCXQ9H320 206 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 MTHFD2LQ9H903 347 aaPredicted RBP16.73■□□□□ 0.27
VRK3-225ENST00000601912 COPS7AQ9UBW8 275 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 WDR45Q9Y484 360 aa16.73■□□□□ 0.27
VRK3-225ENST00000601912 TMEM229AB2RXF0 380 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 STX11O75558 287 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 STK17BO94768 372 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 PSG6Q00889 435 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 CHRNEQ04844 493 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 PIWIL3Q7Z3Z3 882 aaKnown RBP16.72■□□□□ 0.27
VRK3-225ENST00000601912 GALNT6Q8NCL4 622 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 MORN4Q8NDC4 146 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 PIK3R3Q92569 461 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 SLC46A1Q96NT5 459 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 SPSB2Q99619 263 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 Q9N2J8 555 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
VRK3-225ENST00000601912 PADI2Q9Y2J8 665 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 DDAH2O95865 285 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 CAPNS1P04632 268 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 ALPPP05187 535 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 FESP07332 822 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 CD63P08962 238 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 CCNYL3P0C7X3 344 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 FTH1P19P0C7X4 201 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 ITGA2P17301 1181 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 KCNJ5P48544 419 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 SLC37A1P57057 533 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 DUSP7Q16829 419 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 FAM199XQ6PEV8 388 aaPredicted RBP16.72■□□□□ 0.27
VRK3-225ENST00000601912 ZNF517Q6ZMY9 492 aaPredicted RBP16.72■□□□□ 0.27
VRK3-225ENST00000601912 LANCL3Q6ZV70 420 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 ANKRD37Q7Z713 158 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 ZNF721Q8TF20 911 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 PMM1Q92871 262 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 ZNF350Q9GZX5 532 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 AKIRIN1Q9H9L7 192 aaPredicted RBP16.72■□□□□ 0.27
VRK3-225ENST00000601912 POLE3Q9NRF9 147 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 SH3GLB1Q9Y371 365 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 DTNAQ9Y4J8 743 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 PCDHGA3Q9Y5H0 932 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 DSPPQ9NZW4 1301 aa16.72■□□□□ 0.27
VRK3-225ENST00000601912 hCG_2039718K7EN88 272 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 BRINP1O60477 761 aa16.71■□□□□ 0.27
VRK3-225ENST00000601912 FCMRO60667 390 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms