RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 RNF138Q8WVD3 245 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 PPCDCQ96CD2 204 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 ELP4Q96EB1 424 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 COL21A1Q96P44 957 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 OSBPL11Q9BXB4 747 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 METTL7AQ9H8H3 244 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 ACSS1Q9NUB1 689 aaPredicted RBP15.74■□□□□ 0.11
HERC3-214ENST00000601319 DDX18Q9NVP1 670 aaKnown RBP15.74■□□□□ 0.11
HERC3-214ENST00000601319 C15orf41Q9Y2V0 281 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 LRBAP50851 2863 aa15.74■□□□□ 0.11
HERC3-214ENST00000601319 DCHS2Q6V1P9 2916 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 TRGV5A0A0B4J1U4 118 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 TTC36A6NLP5 189 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 UPK1AO00322 258 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 TSPAN2O60636 221 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 SKAP2O75563 359 aaPredicted RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 HPNP05981 417 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 ENDOUP21128 410 aaKnown RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 HPCAL1P37235 193 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 DCTP40126 519 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 MASP1P48740 699 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 PSG6Q00889 435 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 ZNF155Q12901 538 aaPredicted RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 EFR3AQ14156 821 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 MPP2Q14168 576 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 ZNF385BQ569K4 471 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 C6orf136Q5SQH8 315 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 C3P1Q6ZMU1 363 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 R3HCC1LQ7Z5L2 792 aaKnown RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 TMBIM1Q969X1 311 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 SARAFQ96BY9 339 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 ZBED6CLQ96FA7 236 aaPredicted RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 C3orf30Q96M34 536 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 JSRP1Q96MG2 331 aaPredicted RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 NODALQ96S42 347 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 LDAHQ9H6V9 325 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 HAO1Q9UJM8 370 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.73■□□□□ 0.11
HERC3-214ENST00000601319 PCDHGB3Q9Y5G1 929 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 HRH3Q9Y5N1 445 aa15.73■□□□□ 0.11
HERC3-214ENST00000601319 PRAMEF25A6NGN4 478 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 FIGNL2A6NMB9 653 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 NPIPA2E9PIF3 369 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 NPIPA3F8WFD2 350 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 GDF1P27539 372 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 PTPN6P29350 595 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 PTGDSP41222 190 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 SLC18A1P54219 525 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 PNLIPRP2P54317 469 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 ABCE1P61221 599 aaKnown RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 MRPS22P82650 360 aaKnown RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 SMU1Q2TAY7 513 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 CYP27C1Q4G0S4 372 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 BEND6Q5SZJ8 279 aaPredicted RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 TIGD3Q6B0B8 471 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 TMEM211Q6ICI0 200 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 ANKRD26P1Q6NSI1 321 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 MARVELD2Q8N4S9 558 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 CLHC1Q8NHS4 586 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 NEIL3Q8TAT5 605 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 HOXB13Q92826 284 aaPredicted RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 GFM2Q969S9 779 aaKnown RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 TMCO6Q96DC7 493 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 LMF2Q9BU23 707 aaKnown RBP15.72■□□□□ 0.11
HERC3-214ENST00000601319 PNPLA3Q9NST1 481 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 NTMQ9P121 344 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 SPRR3Q9UBC9 169 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 BAIAP2L1Q9UHR4 511 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 ATP6V1HQ9UI12 483 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 RAP2CQ9Y3L5 183 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 APCP25054 2843 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 HCFC1P51610 2035 aa15.72■□□□□ 0.11
HERC3-214ENST00000601319 PRSS44E7EML9 344 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 SNPHO15079 494 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 SCAMP2O15127 329 aaKnown RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 AKAP10O43572 662 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 ITM2AO43736 263 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 WDR1O75083 606 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 ICOSLGO75144 302 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 PEX11AO75192 247 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 LYPLA1O75608 230 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 REM1O75628 298 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 PRPS2P11908 318 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 ACVR2AP27037 513 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 COL8A1P27658 744 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 IL12BP29460 328 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 KRT20P35900 424 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 CDK9P50750 372 aaKnown RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 HSPB3Q12988 150 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 MAD2L1Q13257 205 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 MLC1Q15049 377 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 GXYLT1Q4G148 440 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 ANGPTL8Q6UXH0 198 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 NCCRP1Q6ZVX7 275 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 ZNF551Q7Z340 670 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 SLC44A2Q8IWA5 706 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 LIX1Q8N485 282 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 ZNF781Q8N8C0 355 aa15.71■□□□□ 0.11
HERC3-214ENST00000601319 CIDECQ96AQ7 238 aaPredicted RBP15.71■□□□□ 0.11
HERC3-214ENST00000601319 SORT1Q99523 831 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms