RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 SF3B6Q9Y3B4 125 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 N6AMT1Q9Y5N5 214 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 XIRP2A4UGR9 3374 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 SCN3AQ9NY46 2000 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 UBXN7O94888 489 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CH25HO95992 272 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 ATP5A1P25705 553 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 SSTR4P31391 388 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC9A3P48764 834 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 UBE3AQ05086 875 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CCDC92Q53HC0 331 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 BHLHB9Q6PI77 547 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 RAB43Q86YS6 212 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 ANKK1Q8NFD2 765 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 TTLQ8NG68 377 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 OR9A2Q8NGT5 310 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 ASB16Q96NS5 453 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 KATNB1Q9BVA0 655 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC38A1Q9H2H9 487 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 POLMQ9NP87 494 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 FGF20Q9NP95 211 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 ENTPD4Q9Y227 616 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 NTNG1Q9Y2I2 539 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 GRIP1Q9Y3R0 1128 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CHST2Q9Y4C5 530 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 TMEM129A0AVI4 362 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 PRR23AA6NEV1 266 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 FABP12A6NFH5 140 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 LIMS3P0CW19 117 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 LIMS4P0CW20 117 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 TRHRP34981 398 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 SOX18P35713 384 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 FGL2Q14314 439 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 GNA13Q14344 377 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 KRT33BQ14525 404 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 MRM1Q6IN84 353 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 ZNF730Q6ZMV8 503 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 LHFPL3Q86UP9 236 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 OR52P1PQ8NH57 321 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 SFXN5Q8TD22 340 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 SP7Q8TDD2 431 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 MCOLN1Q9GZU1 580 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 MRPS18AQ9NVS2 196 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 STK25O00506 426 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 CSF3P09919 207 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 PKLRP30613 574 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 AVPR1BP47901 424 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 ANXA11P50995 505 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 FABP5Q01469 135 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 SCN1BQ07699 218 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 TYW3Q6IPR3 259 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 FAM181AQ8N9Y4 354 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 GALNT6Q8NCL4 622 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 OR56A1Q8NGH5 318 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 OR52E1Q8NGJ3 308 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 JPH3Q8WXH2 748 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 CES1P1Q9UKY3 287 aa18.98■□□□□ 0.63
SHKBP1-225ENST00000600733 ATG2BQ96BY7 2078 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 TMCC2O75069 709 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 LALBAP00709 142 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 TPBGQ13641 420 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 MINDY4Q4G0A6 757 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC30A6Q6NXT4 461 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 TMEM145Q8NBT3 493 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 OR2L8Q8NGY9 312 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 GNPDA2Q8TDQ7 276 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 DIO2Q92813 273 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 KAT2AQ92830 837 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 UFD1Q92890 307 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 DDX28Q9NUL7 540 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SPHK1Q9NYA1 384 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 MOSPD1Q9UJG1 213 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC13A4Q9UKG4 626 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 MEIOCA2RUB1 952 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC30A4O14863 429 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 IDH3BO43837 385 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 ALPPP05187 535 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 GNSP15586 552 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 PTNP21246 168 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 PRR5P85299 388 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 TSPAN31Q12999 210 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 LTB4RQ15722 352 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 DDI2Q5TDH0 399 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC48A1Q6P1K1 146 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 QSOX2Q6ZRP7 698 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 MRGPREQ86SM8 312 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 UBE2J2Q8N2K1 259 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 NUP43Q8NFH3 380 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 OR2L5Q8NG80 312 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 OR4F15Q8NGB8 312 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 TP53INP1Q96A56 240 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 ST6GAL2Q96JF0 529 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC38A2Q96QD8 506 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 PHOX2BQ99453 314 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 THAP10Q9P2Z0 257 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 IL20RAQ9UHF4 553 aa18.97■□□□□ 0.63
SHKBP1-225ENST00000600733 ZIC2O95409 532 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 F3P13726 295 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 CSNK2A2P19784 350 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms