RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NMNAT1Q9HAN9 279 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-218ENST00000600383 CTPS2Q9NRF8 586 aa14.15□□□□□ -0.14
HIF3A-218ENST00000600383 SLC13A4Q9UKG4 626 aa14.15□□□□□ -0.14
HIF3A-218ENST00000600383 SLC9A8Q9Y2E8 581 aa14.15□□□□□ -0.14
HIF3A-218ENST00000600383 WDR45Q9Y484 360 aa14.15□□□□□ -0.14
HIF3A-218ENST00000600383 TTC28Q96AY4 2481 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 H3BNH8 94 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 YKT6O15498 198 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ZIC2O95409 532 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 CER1O95813 267 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 EPPINO95925 133 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 CBX7O95931 251 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PABPC4LP0CB38 370 aaKnown RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 SP9P0CG40 484 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 HSD17B7P56937 341 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 MAP4K2Q12851 820 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FGD3Q5JSP0 725 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FIGNL1Q6PIW4 674 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 KMT5CQ86Y97 462 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 C8orf59Q8N0T1 100 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 OR9Q2Q8NGE9 314 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 OR52P1PQ8NH57 321 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ADAMTS18Q8TE60 1221 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ALPK1Q96QP1 1244 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 SDF2Q99470 211 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PRR14Q9BWN1 585 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 SLC7A5P2Q9GIP4 190 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF768Q9H5H4 540 aaKnown RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 CLK4Q9HAZ1 481 aaKnown RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 SEMA5BQ9P283 1151 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 BLACEA4D250 179 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FRS3O43559 492 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 HYAL3O43820 417 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 SLITRK5O94991 958 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 LGI1O95970 557 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 CLPTM1O96005 669 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 IL7RP16871 459 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ELK4P28324 431 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 EPHA2P29317 976 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 EMP3P54852 163 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF155Q12901 538 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ARHGAP11BQ3KRB8 267 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 COLEC12Q5KU26 742 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 RNF220Q5VTB9 566 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PRAMEF8Q5VWM4 474 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PRAMEF7Q5VXH5 474 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FRRS1Q6ZNA5 592 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PRSS58Q8IYP2 241 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FAM181AQ8N9Y4 354 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 TSPAN14Q8NG11 270 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 OR4C15Q8NGM1 316 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 OR6T1Q8NGN1 323 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF501Q96CX3 271 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 CLIP3Q96DZ5 547 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 LRRN3Q9H3W5 708 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 MTHFD2LQ9H903 347 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FANCEQ9HB96 536 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 NECTIN3Q9NQS3 549 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 FBXO34Q9NWN3 711 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 PCDHGA8Q9Y5G5 932 aa14.14□□□□□ -0.15
HIF3A-218ENST00000600383 TRBV4-1A0A0J9YWV2 114 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 CLDN24A6NM45 220 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 SYPP08247 313 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 SMIM18P0DKX4 95 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 S1PR1P21453 382 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 HOXD12P35452 270 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 RNF144AP50876 292 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-218ENST00000600383 CDH15P55291 814 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 ANGPT1Q15389 498 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 VWA2Q5GFL6 755 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 DCST2Q5T1A1 773 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 TYW3Q6IPR3 259 aaKnown RBP14.13□□□□□ -0.15
HIF3A-218ENST00000600383 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 FAHD1Q6P587 224 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 SLC23A3Q6PIS1 610 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 THAP5Q7Z6K1 395 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 RABEPKQ7Z6M1 372 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF605Q86T29 641 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 IFI44Q8TCB0 444 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 ATOH1Q92858 354 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-218ENST00000600383 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 PINK1Q9BXM7 581 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 ZNF304Q9HCX3 659 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 PNO1Q9NRX1 252 aaKnown RBP14.13□□□□□ -0.15
HIF3A-218ENST00000600383 CDC14AQ9UNH5 594 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 CLDN16Q9Y5I7 305 aa14.13□□□□□ -0.15
HIF3A-218ENST00000600383 ASCC3Q8N3C0 2202 aaKnown RBP14.12□□□□□ -0.15
HIF3A-218ENST00000600383 GXYLT2A0PJZ3 443 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 A8MUA0 341 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 BCKDKO14874 412 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 CCNB2O95067 398 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 CDH2P19022 906 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-218ENST00000600383 MAPK10P53779 464 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 DUSP8Q13202 625 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 PEX5LQ8IYB4 626 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 CLIP4Q8N3C7 705 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 NAT6Q93015 286 aa14.12□□□□□ -0.15
HIF3A-218ENST00000600383 GTPBP3Q969Y2 492 aaKnown RBP14.12□□□□□ -0.15
HIF3A-218ENST00000600383 CNDP2Q96KP4 475 aaKnown RBP14.12□□□□□ -0.15
HIF3A-218ENST00000600383 OR6C1Q96RD1 312 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms