RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TAGLN3Q9UI15 199 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 FAF1Q9UNN5 650 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 YARS2Q9Y2Z4 477 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TNRC6AQ8NDV7 1962 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 MKRN2OSH3BPM6 223 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 OR6B1O95007 311 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 KRT75O95678 551 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 WDPCPO95876 746 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ALOX5P09917 674 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 SOX3P41225 446 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 SSR4P51571 173 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 RHDQ02161 417 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 SELPLGQ14242 412 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ZNHIT3Q15649 155 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 IGFL2Q6UWQ7 119 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ANGPTL8Q6UXH0 198 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 DNAJB8Q8NHS0 232 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC22A8Q8TCC7 542 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 MIPOL1Q8TD10 442 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 GPR151Q8TDV0 419 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 CDS1Q92903 461 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 RAB8BQ92930 207 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ABHD17AQ96GS6 310 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ANKRD27Q96NW4 1050 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 PIGUQ9H490 435 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 ANKRD10Q9NXR5 420 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 TEKT2Q9UIF3 430 aa18.47■□□□□ 0.55
SHKBP1-222ENST00000600320 TTC36A6NLP5 189 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 ALPPP05187 535 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 OR12D1P0DN82 309 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 ABCD3P28288 659 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 TRHRP34981 398 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 KCNAB2Q13303 367 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 DESI1Q6ICB0 168 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 EXD3Q8N9H8 876 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 PCYOX1LQ8NBM8 494 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 OR52N2Q8NGI0 321 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 ADAMTS15Q8TE58 950 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 TMBIM1Q969X1 311 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 OMA1Q96E52 524 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 HSPBAP1Q96EW2 488 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 STACQ99469 402 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 ARHGAP9Q9BRR9 750 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 CSAG2Q9Y5P2 127 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 NPFFR2Q9Y5X5 522 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 GMEB1Q9Y692 573 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 CACNA1GO43497 2377 aa18.46■□□□□ 0.55
SHKBP1-222ENST00000600320 ACOX3O15254 700 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 IGKV1D-16P01601 117 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 KRT16P08779 473 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 ETFAP13804 333 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 CD97P48960 835 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 KHKP50053 298 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 MTPNP58546 118 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 TUBA3CQ13748 450 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 TUBA3EQ6PEY2 450 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 ZNF227Q86WZ6 799 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 TAGAPQ8N103 731 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 SLC34A3Q8N130 599 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 SLC15A4Q8N697 577 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 COX18Q8N8Q8 333 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 FBXO27Q8NI29 283 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 ASB15Q8WXK1 588 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 RMND5BQ96G75 393 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 EFCAB1Q9HAE3 211 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 Q9N2J8 555 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 DUSP22Q9NRW4 184 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 GIN1Q9NXP7 522 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 ABI3Q9P2A4 366 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 CBLCQ9ULV8 474 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 TP53TG5Q9Y2B4 290 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 OR10H1Q9Y4A9 318 aa18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 DSPP15924 2871 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-222ENST00000600320 PRAMEF27A3QJZ7 478 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 CCT8L1PA6NM43 557 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 A8MVJ9 347 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 HMGN4O00479 90 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 TSPAN2O60636 221 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 UBOX5O94941 541 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 NUDT7P0C024 238 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 FBXO45P0C2W1 286 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 T-ENOLP0DO92 83 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 CD96P40200 585 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 NUDT2P50583 147 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 HLCSP50747 726 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 MRPS22P82650 360 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 PLCXD2Q0VAA5 305 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 FUT5Q11128 374 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 RGNQ15493 299 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 ZNF791Q3KP31 576 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 CYP27C1Q4G0S4 372 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 NANOGP8Q6NSW7 305 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 PCSK4Q6UW60 755 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 IL20RBQ6UXL0 311 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 OLIG3Q7RTU3 272 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 TMEM156Q8N614 296 aa18.44■□□□□ 0.54
SHKBP1-222ENST00000600320 BCORP1Q8N888 145 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms