RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 RPUSD3Q6P087 351 aaKnown RBP17.82■□□□□ 0.44
UPF1-209ENST00000600310 CDC73Q6P1J9 531 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 C6orf120Q7Z4R8 191 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 MDGA2Q7Z553 956 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 PRR22Q8IZ63 422 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 SLC34A3Q8N130 599 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 CLEC4FQ8N1N0 589 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 TSPEARQ8WU66 669 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 OMA1Q96E52 524 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 ACTRT3Q9BYD9 372 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 Q9N2J8 555 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 SH2D2AQ9NP31 389 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 TIMMDC1Q9NPL8 285 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 LUZP4Q9P127 313 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 MAP10Q9P2G4 905 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 VPS4AQ9UN37 437 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 OR10H1Q9Y4A9 318 aa17.82■□□□□ 0.44
UPF1-209ENST00000600310 A0A1W2PP18 115 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 PPM1BO75688 479 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 C1QL1O75973 258 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 KRT16P08779 473 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ALOX5P09917 674 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ZCCHC18P0CG32 403 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ACP2P11117 423 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 TRPC1P48995 793 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 PLCXD2Q0VAA5 305 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 COLEC12Q5KU26 742 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 SAXO2Q658L1 398 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ZNF621Q6ZSS3 439 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ZNF843Q8N446 348 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 TRIML2Q8N7C3 387 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 TMEM178AQ8NBL3 297 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 SLC16A11Q8NCK7 471 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 PSD4Q8NDX1 1056 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 OR4N2Q8NGD1 307 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 SLC9A6Q92581 669 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 GTF2H4Q92759 462 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 TMBIM1Q969X1 311 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 PHF12Q96QT6 1004 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 STACQ99469 402 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 SLC35A5Q9BS91 424 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 YIPF4Q9BSR8 244 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 HES7Q9BYE0 225 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 EPN3Q9H201 632 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 KLHL1Q9NR64 748 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 GIN1Q9NXP7 522 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 ADAM21Q9UKJ8 722 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 CBLCQ9ULV8 474 aa17.81■□□□□ 0.44
UPF1-209ENST00000600310 FAF1Q9UNN5 650 aaPredicted RBP17.81■□□□□ 0.44
UPF1-209ENST00000600310 ASPDHA6ND91 283 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 NME2P1O60361 137 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 CCDC22O60826 627 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 SOX30O94993 753 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 NME2P22392 152 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 FBXW4P57775 412 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 KLF10Q13118 480 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 UBAP2LQ14157 1087 aaKnown RBP17.8■□□□□ 0.44
UPF1-209ENST00000600310 DUSP5Q16690 384 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 SLC2A7Q6PXP3 512 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 GK5Q6ZS86 529 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 NUP54Q7Z3B4 507 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 GALNTL5Q7Z4T8 443 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 PIGWQ7Z7B1 504 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 OR10G3Q8NGC4 313 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 MIPOL1Q8TD10 442 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 GPR151Q8TDV0 419 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 PAQR8Q8TEZ7 354 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 NEURL3Q96EH8 262 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 SLC35A4Q96G79 324 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 NMUR2Q9GZQ4 415 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 PIGUQ9H490 435 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 DUSP22Q9NRW4 184 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 KLF13Q9Y2Y9 288 aaPredicted RBP17.8■□□□□ 0.44
UPF1-209ENST00000600310 KALRNO60229 2985 aa17.8■□□□□ 0.44
UPF1-209ENST00000600310 GXYLT2A0PJZ3 443 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 OR6C70A6NIJ9 312 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 B8ZZF3 427 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 TP53I11O14683 189 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SLC22A2O15244 555 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SUV39H1O43463 412 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 TSPAN2O60636 221 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SHOX2O60902 331 aaPredicted RBP17.79■□□□□ 0.44
UPF1-209ENST00000600310 ABCB7O75027 752 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 REM1O75628 298 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 GSNP06396 782 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SNRPB2P08579 225 aaKnown RBP17.79■□□□□ 0.44
UPF1-209ENST00000600310 MATN1P21941 496 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 PTPN6P29350 595 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 KRT20P35900 424 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 PIGAP37287 484 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 MAN2A2P49641 1150 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 INAQ16352 499 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 C6orf10Q5SRN2 563 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SLC22A10Q63ZE4 541 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 FAM13CQ8NE31 585 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 FBXO30Q8TB52 745 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SPPL2AQ8TCT8 520 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 ADAMTS15Q8TE58 950 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 JADE3Q92613 823 aa17.79■□□□□ 0.44
UPF1-209ENST00000600310 SLC35G5Q96KT7 338 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms