RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 KIAA0040Q15053 153 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 RFTN2Q52LD8 501 aaPredicted RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 NIPAL1Q6NVV3 410 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 EID3Q8N140 333 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 RNF175Q8N4F7 328 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 TMEM251Q8N6I4 163 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 ASB15Q8WXK1 588 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 ROPN1LQ96C74 230 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 C11orf24Q96F05 449 aaPredicted RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 HPF1Q9NWY4 346 aa12.63□□□□□ -0.39
IRF3-225ENST00000600022 PRPF19Q9UMS4 504 aaKnown RBP12.63□□□□□ -0.39
IRF3-225ENST00000600022 PHF3Q92576 2039 aaKnown RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 URADA6NGE7 173 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 MRASO14807 208 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 CFLARO15519 480 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 LDB3O75112 727 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 IFNA16P05015 189 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 CCL3P10147 92 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 G6PDP11413 515 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 ACVR2AP27037 513 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 ASMTP46597 345 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 LIM2P55344 173 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 HSD17B7P56937 341 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 RAB38P57729 211 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 TBL3Q12788 808 aaKnown RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 MYBPHQ13203 477 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 REP15Q6BDI9 236 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 DGAT2L6Q6ZPD8 337 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 TRILQ7L0X0 811 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 UBE3DQ7Z6J8 389 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 DEFB107AQ8IZN7 70 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 LIX1Q8N485 282 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 GAL3ST3Q96A11 431 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 F2RL3Q96RI0 385 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 CADM1Q9BY67 442 aaKnown RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 ALOXE3Q9BYJ1 711 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 PRDM7Q9NQW5 492 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 CCM2LQ9NUG4 571 aaPredicted RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 SIRT5Q9NXA8 310 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 TUBA8Q9NY65 449 aaPredicted RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 BCAP29Q9UHQ4 241 aa12.62□□□□□ -0.39
IRF3-225ENST00000600022 LEF1Q9UJU2 399 aaPredicted RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
IRF3-225ENST00000600022 A0A1W2PP18 115 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 KDM4EB2RXH2 506 aaPredicted RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 HRKO00198 91 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 RTCAO00442 366 aaKnown RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 CTNSO60931 367 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 SH3BGRLO75368 114 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 RFPL3SP0C7P2 107 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 BCKDHAP12694 445 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 CD1EP15812 388 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 DDX5P17844 614 aaKnown RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 ENDOUP21128 410 aaKnown RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 CNR1P21554 472 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 PIGAP37287 484 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 STXBP1P61764 594 aaKnown RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 UFM1P61960 85 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 SLC25A3Q00325 362 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 RCAN2Q14206 197 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ADPRMQ3LIE5 342 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 NOXRED1Q6NXP6 359 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 GALNT18Q6P9A2 607 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ABHD17CQ6PCB6 329 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 HACD2Q6Y1H2 254 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 HSDL2Q6YN16 418 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ZNF793Q6ZN11 406 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 PAGE2Q7Z2X7 111 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 OR4N5Q8IXE1 308 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ZZZ3Q8IYH5 903 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 PGAM4Q8N0Y7 254 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 APIPQ96GX9 242 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 MAPKAP1Q9BPZ7 522 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 NPLQ9BXD5 320 aaPredicted RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 OR8D2Q9GZM6 311 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
IRF3-225ENST00000600022 WDR41Q9HAD4 459 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ADAP2Q9NPF8 381 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 ALKBH4Q9NXW9 302 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 SPRR3Q9UBC9 169 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 DAPP1Q9UN19 280 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 CLCA3PQ9Y6N3 262 aa12.61□□□□□ -0.39
IRF3-225ENST00000600022 A0A1B0GVC2 190 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 GNG14A0A1W2PPG7 69 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 WASHC1A8K0Z3 465 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 CLDN4O14493 209 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 B3GALT2O43825 422 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 CTAG2O75638 210 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 STAMBPO95630 424 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms