RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 PGM3O95394 542 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 IGKV3-11P04433 115 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 BCHEP06276 602 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 C8BP07358 591 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 GUSBP08236 651 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 SOX18P35713 384 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 PPICP45877 212 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 POU6F2P78424 691 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-209ENST00000597423 RTP5Q14D33 572 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 DUSP5Q16690 384 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 CYP27C1Q4G0S4 372 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 FAM98BQ52LJ0 330 aaKnown RBP14.17□□□□□ -0.14
TRIM28-209ENST00000597423 CRB2Q5IJ48 1285 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 HEPHL1Q6MZM0 1159 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 HSDL2Q6YN16 418 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 LRRC74BQ6ZQY2 392 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 TMEM19Q96HH6 336 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 VSTM2LQ96N03 204 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 IP6K3Q96PC2 410 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 G6PC3Q9BUM1 346 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 NUDT9Q9BW91 350 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF700Q9H0M5 742 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 SERHL2Q9H4I8 314 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 MTHFD2LQ9H903 347 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-209ENST00000597423 POLE3Q9NRF9 147 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 OLAHQ9NV23 265 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 ANAPC2Q9UJX6 822 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 ANGPTL2Q9UKU9 493 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF232Q9UNY5 417 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 OR10H1Q9Y4A9 318 aa14.17□□□□□ -0.14
TRIM28-209ENST00000597423 PTPRZ1P23471 2315 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 C2orf92A0A1B0GVN3 265 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 DHRS12A0PJE2 317 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 A8MVJ9 347 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 M0QX08 132 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 HRKO00198 91 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 PEX12O00623 359 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 SUV39H1O43463 412 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 STX11O75558 287 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 ZFAND5O76080 213 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 SERPINA1P01009 418 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 UMODP07911 640 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 ACP2P11117 423 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 ETS2P15036 469 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 ATP6V1B2P21281 511 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 ATP6V1C1P21283 382 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 SLC7A1P30825 629 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 TRHRP34981 398 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 MAP3K8P41279 467 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 PSMD4P55036 377 aaKnown RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 CHRNB3Q05901 458 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 SYPL1Q16563 259 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 LRRC23Q53EV4 343 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 EXOSC6Q5RKV6 272 aaKnown RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 NDUFAF7Q7L592 441 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 RAB43Q86YS6 212 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 CHDHQ8NE62 594 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 FBXO30Q8TB52 745 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 CDS1Q92903 461 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 NXPE2Q96DL1 559 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 DUS3LQ96G46 650 aaKnown RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 BTBD9Q96Q07 612 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 TREX2Q9BQ50 279 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 SEMA4CQ9C0C4 833 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 S100A14Q9HCY8 104 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 RYDENQ9NUL5 291 aaKnown RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 GPR55Q9Y2T6 319 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-209ENST00000597423 PCDHGA6Q9Y5G7 932 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 KNTC1P50748 2209 aa14.16□□□□□ -0.14
TRIM28-209ENST00000597423 IGHV3-20A0A0C4DH32 117 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 ACOX3O15254 700 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 SEC24DO94855 1032 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 ZNF682O95780 498 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 EFNA3P52797 238 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 PCBP3P57721 371 aaKnown RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 SLC26A5P58743 744 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 DUSP8Q13202 625 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 DECR1Q16698 335 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 IRAK1BP1Q5VVH5 260 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 FKBP9P1Q75LS8 142 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 CBLL1Q75N03 491 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 EIF3MQ7L2H7 374 aaKnown RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 MARCH9Q86YJ5 346 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 ANKFN1Q8N957 763 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 SIMC1Q8NDZ2 872 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 C17orf47Q8NEP4 570 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 NFAM1Q8NET5 270 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 M1APQ8TC57 530 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 SPPL2AQ8TCT8 520 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 NKD1Q969G9 470 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 TP53INP1Q96A56 240 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 HSPBAP1Q96EW2 488 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 PYURFQ96I23 114 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 LCORQ96JN0 433 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 SDF2Q99470 211 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 MAGIXQ9H6Y5 334 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 CCM2LQ9NUG4 571 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-209ENST00000597423 BAG5Q9UL15 447 aa14.15□□□□□ -0.14
TRIM28-209ENST00000597423 CBLCQ9ULV8 474 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms