RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
USE1-207ENST00000596136 NUDCD3Q8IVD9 361 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 DDIASQ8IXT1 998 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 CDC26Q8NHZ8 85 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 HOXB13Q92826 284 aaPredicted RBP11.94□□□□□ -0.5
USE1-207ENST00000596136 TMBIM1Q969X1 311 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 SARAFQ96BY9 339 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 MTERF3Q96E29 417 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 COL21A1Q96P44 957 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 CHST11Q9NPF2 352 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 PNPLA3Q9NST1 481 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 NTMQ9P121 344 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 SPRR3Q9UBC9 169 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 C15orf41Q9Y2V0 281 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 WDR1O75083 606 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ICOSLGO75144 302 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 NME6O75414 186 aaPredicted RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 SNUPNO95149 360 aaKnown RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 SERPINE1P05121 402 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ACVR2AP27037 513 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 HTR1EP28566 365 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 GRNP28799 593 aaKnown RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 PTPN6P29350 595 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 MAP3K8P41279 467 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 MC3RP41968 323 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ASMTP46597 345 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 CDK9P50750 372 aaKnown RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 EFR3AQ14156 821 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ZNF385BQ569K4 471 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 NHSL2Q5HYW2 709 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 RTL6Q6ICC9 239 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 TMEM107Q6UX40 140 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 TMCO6Q96DC7 493 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 JSRP1Q96MG2 331 aaPredicted RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 GNRHR2Q96P88 292 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 TSSK3Q96PN8 268 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 LDAHQ9H6V9 325 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 METTL7AQ9H8H3 244 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ACSS1Q9NUB1 689 aaPredicted RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 BAIAP2L1Q9UHR4 511 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 ATP6V1HQ9UI12 483 aa11.93□□□□□ -0.5
USE1-207ENST00000596136 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.93□□□□□ -0.5
USE1-207ENST00000596136 APCP25054 2843 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 NUP214P35658 2090 aaPredicted RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 TTC36A6NLP5 189 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 FIGNL2A6NMB9 653 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 TMEM114B3SHH9 223 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 SNPHO15079 494 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 PDPK1O15530 556 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 HNRNPRO43390 633 aaKnown RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 REM1O75628 298 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ZWINTO95229 277 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 GDF1P27539 372 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 MAPK1P28482 360 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 MLC1Q15049 377 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 GALNTL6Q49A17 601 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 CYP27C1Q4G0S4 372 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 C6orf136Q5SQH8 315 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 WLSQ5T9L3 541 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ACAD11Q709F0 780 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ZNF551Q7Z340 670 aaPredicted RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 R3HCC1LQ7Z5L2 792 aaKnown RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ACBD4Q8NC06 268 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 OR5M9Q8NGP3 310 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 OR1J4Q8NGS1 313 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 GFM2Q969S9 779 aaKnown RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 PPCDCQ96CD2 204 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ZBED6CLQ96FA7 236 aaPredicted RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 PKNOX2Q96KN3 472 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ADOQ96SZ5 270 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 LMF2Q9BU23 707 aaKnown RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 OSBPL11Q9BXB4 747 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 SLC6A15Q9H2J7 730 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 DDX18Q9NVP1 670 aaKnown RBP11.92□□□□□ -0.5
USE1-207ENST00000596136 COQ3Q9NZJ6 369 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ACAD8Q9UKU7 415 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 MED12Q93074 2177 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
USE1-207ENST00000596136 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 PRAMEF25A6NGN4 478 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 AKAP10O43572 662 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 ITM2AO43736 263 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 PEX11AO75192 247 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 LYPLA1O75608 230 aaPredicted RBP11.91□□□□□ -0.5
USE1-207ENST00000596136 CBR3O75828 277 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 PRPS2P11908 318 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GABRA1P14867 456 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 GRK2P25098 689 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 PTGER4P35408 488 aa11.91□□□□□ -0.5
USE1-207ENST00000596136 MASP1P48740 699 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms