RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ART5Q96L15 291 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 BEX2Q9BXY8 128 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 MRPL46Q9H2W6 279 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SLCO5A1Q9H2Y9 848 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 IPPKQ9H8X2 491 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 ACTR8Q9H981 624 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 GALNT9Q9HCQ5 603 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 ELOVL5Q9NYP7 299 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 TMCO1Q9UM00 188 aa12.41□□□□□ -0.42
SHKBP1-208ENST00000595726 FRG2CA6NGY1 282 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 CAPN14A8MX76 684 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 H0YIV9 168 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 OVOL3O00110 214 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 STX16O14662 325 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 SMIM24O75264 130 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 SCELO95171 688 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TGFB1P01137 390 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 CGAP01215 116 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 SBK3P0C264 359 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TCEA1P23193 301 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 CHMP24386 653 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PCYT1AP49585 367 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 GFRA1P56159 465 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 RPS4XP62701 263 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PLIN5Q00G26 463 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TGM3Q08188 693 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 FUT7Q11130 342 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 DDX39BQ13838 428 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 BEX5Q5H9J7 111 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TMEM151AQ8N4L1 468 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 L3MBTL4Q8NA19 623 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 SRFBP1Q8NEF9 429 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 HUS1BQ8NHY5 278 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 RIT1Q92963 219 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 CMTM7Q96FZ5 175 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 MRPL57Q9BQC6 102 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TBCDQ9BTW9 1192 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 ROGDIQ9GZN7 287 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 LRTM1Q9HBL6 345 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PSMC3IPQ9P2W1 217 aaPredicted RBP12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PCTPQ9UKL6 214 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 SPACA6W5XKT8 324 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 PRR14LQ5THK1 2151 aa12.4□□□□□ -0.42
SHKBP1-208ENST00000595726 GLOD5A6NK44 160 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 OR7A17O14581 309 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 OR10H2O60403 315 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 ICOSLGO75144 302 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 SOD3P08294 240 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 RPS17P08708 135 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 TBXA2RP21731 343 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 HIST1H1TP22492 207 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 GCKP35557 465 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 PIK3CBP42338 1070 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 CLDN18P56856 261 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 SLAMF1Q13291 335 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 EXOC3L2Q2M3D2 409 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 KHDRBS2Q5VWX1 349 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 ST13P4Q8IZP2 240 aaPredicted RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 ARIH2OSQ8N7S6 290 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 OR52B6Q8NGF0 335 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 WDR20Q8TBZ3 569 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 MZB1Q8WU39 189 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 FIG4Q92562 907 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 TRMT61AQ96FX7 289 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 NODALQ96S42 347 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 MTERF1Q99551 399 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 PLA2G12AQ9BZM1 189 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 OR51B5Q9H339 312 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 NOL11Q9H8H0 719 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 ZBTB26Q9HCK0 441 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 TAS2R10Q9NYW0 307 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 RNF11Q9Y3C5 154 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 PCDHGA11Q9Y5H2 935 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 PKD1L1Q8TDX9 2849 aa12.39□□□□□ -0.43
SHKBP1-208ENST00000595726 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 A0A1W2PS29 197 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 OR6C76A6NM76 312 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 A8MT66 165 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 PLPP1O14494 284 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 HCRTR2O43614 444 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 TMCC2O75069 709 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 CLDN9O95484 217 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 IGHV4-39P01824 125 aa12.38□□□□□ -0.43
SHKBP1-208ENST00000595726 CRHP06850 196 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms