RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MID2Q9UJV3 735 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 MAPRE3Q9UPY8 281 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 CAMK2AQ9UQM7 478 aa21.42■■□□□ 1.02
LSM4-204ENST00000594828 TLDC2A0PJX2 215 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 CBR3O75828 277 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 JUNP05412 331 aaKnown RBP21.41■■□□□ 1.02
LSM4-204ENST00000594828 KRT20P35900 424 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 NCBP2P52298 156 aaKnown RBP eCLIP21.41■■□□□ 1.024e-7■□□□□ 8.2
LSM4-204ENST00000594828 PSPHP78330 225 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 PRSS53Q2L4Q9 553 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 NOXRED1Q6NXP6 359 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 ABTB1Q969K4 478 aaPredicted RBP21.41■■□□□ 1.02
LSM4-204ENST00000594828 SLC24A3Q9HC58 644 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 MYNNQ9NPC7 610 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 CSMD1Q96PZ7 3565 aa21.41■■□□□ 1.02
LSM4-204ENST00000594828 TSPAN2O60636 221 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 SEC22BO75396 215 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 IL12BP29460 328 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 GCKP35557 465 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 EFR3AQ14156 821 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 CLEC6AQ6EIG7 209 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 NPSR1Q6W5P4 371 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 LARP4Q71RC2 724 aaKnown RBP eCLIP21.4■■□□□ 1.027e-6■□□□□ 9
LSM4-204ENST00000594828 LACC1Q8IV20 430 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 C10orf107Q8IVU9 208 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 SLC44A2Q8IWA5 706 aaPredicted RBP21.4■■□□□ 1.02
LSM4-204ENST00000594828 WDSUB1Q8N9V3 476 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 TNIP2Q8NFZ5 429 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 WDYHV1Q96HA8 205 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 METTL2AQ96IZ6 378 aaKnown RBP21.4■■□□□ 1.02
LSM4-204ENST00000594828 ANKZF1Q9H8Y5 726 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 SERHLQ9NQF3 203 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 DCHS2Q6V1P9 2916 aa21.4■■□□□ 1.02
LSM4-204ENST00000594828 PDZD2O15018 2839 aa21.39■■□□□ 1.02
LSM4-204ENST00000594828 A0A087WV62 115 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 KDM4EB2RXH2 506 aaPredicted RBP21.39■■□□□ 1.01
LSM4-204ENST00000594828 SLC28A1O00337 649 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 COQ9O75208 318 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 SLITRK5O94991 958 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 ACTL6AO96019 429 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 CEACAM8P31997 349 aaPredicted RBP21.39■■□□□ 1.01
LSM4-204ENST00000594828 TIMP3P35625 211 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 PNLIPRP2P54317 469 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 OR2W6PQ8NHA6 318 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 ZNF559Q9BR84 538 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 IQCGQ9H095 443 aaKnown RBP21.39■■□□□ 1.01
LSM4-204ENST00000594828 KCNN3Q9UGI6 736 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 OR10H1Q9Y4A9 318 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 CCL27Q9Y4X3 112 aa21.39■■□□□ 1.01
LSM4-204ENST00000594828 ARHGAP21Q5T5U3 1957 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 TRIM13O60858 407 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 IL2RAP01589 272 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 NTSP30990 170 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 MC3RP41968 323 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 WNT3P56703 355 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 PCLAFQ15004 111 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 KIAA0040Q15053 153 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 DCST1Q5T197 706 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 CES4AQ5XG92 561 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 NSUN5P2Q63ZY6 315 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 IKBIPQ70UQ0 350 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 PLCZ1Q86YW0 608 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 NAXEQ8NCW5 288 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 OR4N2Q8NGD1 307 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 OR14L1PQ8NHC6 308 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 TRIB1Q96RU8 372 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 GATA5Q9BWX5 397 aaPredicted RBP21.38■■□□□ 1.01
LSM4-204ENST00000594828 GLIPR2Q9H4G4 154 aa21.38■■□□□ 1.01
LSM4-204ENST00000594828 C19orf53Q9UNZ5 99 aaPredicted RBP21.38■■□□□ 1.01
LSM4-204ENST00000594828 PLOD2O00469 737 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 DVL2O14641 736 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 AZIN1O14977 448 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 RGS14O43566 566 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 BMP5P22003 454 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 PRPH2P23942 346 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 DLX5P56178 289 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 MRPS22P82650 360 aaKnown RBP21.37■■□□□ 1.01
LSM4-204ENST00000594828 PSG6Q00889 435 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 ZNF155Q12901 538 aaPredicted RBP21.37■■□□□ 1.01
LSM4-204ENST00000594828 MYBPHQ13203 477 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 TMEM107Q6UX40 140 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 EFHD2Q96C19 240 aaPredicted RBP21.37■■□□□ 1.01
LSM4-204ENST00000594828 EGLN2Q96KS0 407 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 AMDHD1Q96NU7 426 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 TRMOQ9BU70 441 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 OR2B2Q9GZK3 357 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 LRTM1Q9HBL6 345 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 C1orf109Q9NX04 203 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 ZNF629Q9UEG4 869 aaPredicted RBP21.37■■□□□ 1.01
LSM4-204ENST00000594828 ITGB1BP2Q9UKP3 347 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 FIS1Q9Y3D6 152 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 WIF1Q9Y5W5 379 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 PTGDR2Q9Y5Y4 395 aa21.37■■□□□ 1.01
LSM4-204ENST00000594828 INTS1Q8N201 2190 aaKnown RBP21.37■■□□□ 1.01
LSM4-204ENST00000594828 CD8B2A6NJW9 211 aa21.36■■□□□ 1.01
LSM4-204ENST00000594828 NPIPB8E9PQR5 432 aa21.36■■□□□ 1.01
LSM4-204ENST00000594828 SH2D4BQ5SQS7 431 aa21.36■■□□□ 1.01
LSM4-204ENST00000594828 ARSKQ6UWY0 536 aa21.36■■□□□ 1.01
LSM4-204ENST00000594828 RIBC1Q8N443 379 aaPredicted RBP21.36■■□□□ 1.01
LSM4-204ENST00000594828 BANPQ8N9N5 519 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms