RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NT5EP21589 574 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 CEACAM8P31997 349 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 TIMP3P35625 211 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ASCL1P50553 236 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ABCE1P61221 599 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 C2orf80Q0P641 193 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 MPP2Q14168 576 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ACSF3Q4G176 576 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 NOXRED1Q6NXP6 359 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 TAGAPQ8N103 731 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF441Q8N8Z8 693 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ANKRD42Q8N9B4 389 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 NAXEQ8NCW5 288 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 FAM222BQ8WU58 562 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 RNASE6Q93091 150 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 TP53INP1Q96A56 240 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 TLCD1Q96CP7 247 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 LRRC46Q96FV0 321 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF597Q96LX8 424 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 PPP3R2Q96LZ3 170 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 JSRP1Q96MG2 331 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 EBPLQ9BY08 206 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 LIME1Q9H400 295 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF629Q9UEG4 869 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 FOXD3Q9UJU5 478 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 CCL27Q9Y4X3 112 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 POLR3HQ9Y535 204 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 CAPN14A8MX76 684 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 DIAPH2O60879 1101 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 ATP1B1P05026 303 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 DDCP20711 480 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 GDF1P27539 372 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 MAPK1P28482 360 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 UQCRC1P31930 480 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 FEN1P39748 380 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 CRYZQ08257 329 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 DUSP8Q13202 625 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 STX3Q13277 289 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 SNTB1Q13884 538 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 FLYWCH1Q4VC44 716 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 TMEM198Q66K66 360 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 Q6ZSR9 355 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 IKBIPQ70UQ0 350 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 TRIM42Q8IWZ5 723 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 PM20D2Q8IYS1 436 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 OR7G1Q8NGA0 311 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 AGR3Q8TD06 166 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 SECISBP2Q96T21 854 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 TIMP4Q99727 224 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 TUBB1Q9H4B7 451 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 MIEF1Q9NQG6 463 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 HEY2Q9UBP5 337 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 ZDHHC2Q9UIJ5 367 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
SHKBP1-203ENST00000594298 C15orf38-AP3S2A0A0A6YYH1 394 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 A6NNC1 897 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 TP53I11O14683 189 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 PIP5K1BO14986 540 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 SNX4O95219 450 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 KLK2P20151 261 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 BMP5P22003 454 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 MPIP34949 423 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC1A6P48664 564 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 TRPC1P48995 793 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 PPP2R2AP63151 447 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 FUT7Q11130 342 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 DAZAP2Q15038 168 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 KIAA0040Q15053 153 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 RPS6KA2Q15349 733 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 HLA-DQA1Q5Y7H0 255 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 POMZP3Q6PJE2 187 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 CDC20BQ86Y33 519 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 MMP21Q8N119 569 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 TNIP2Q8NFZ5 429 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 SPPL2AQ8TCT8 520 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 DOK4Q8TEW6 326 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 DIO2Q92813 273 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 MBD6Q96DN6 1003 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 ALPK1Q96QP1 1244 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 PRDM14Q9GZV8 571 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 UBQLN3Q9H347 655 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC35C2Q9NQQ7 365 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 CBLCQ9ULV8 474 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 CFL2Q9Y281 166 aa16.04■□□□□ 0.16
SHKBP1-203ENST00000594298 C2orf92A0A1B0GVN3 265 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 TMEM233B4DJY2 109 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 LSM1O15116 133 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 BCAS2O75934 225 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 LRATO95237 230 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 HPNP05981 417 aa16.03■□□□□ 0.16
SHKBP1-203ENST00000594298 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms