RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 RAB18Q9NP72 206 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 SDHAF3Q9NRP4 125 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PHPT1Q9NRX4 125 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 STX18Q9P2W9 335 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 B9D1Q9UPM9 204 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 RUVBL2Q9Y230 463 aaKnown RBP3.86□□□□□ -1.79
LINC00649-204ENST00000593977 NFE2L3Q9Y4A8 694 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 WNT6Q9Y6F9 365 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 STON1Q9Y6Q2 735 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 CCDC171Q6TFL3 1326 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 TLN2Q9Y4G6 2542 aa3.86□□□□□ -1.79
LINC00649-204ENST00000593977 PTPRDP23468 1912 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 A0A096LPK6 155 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PPIAL4DF5H284 164 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MS4A18H0YCH9 400 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CLIC1O00299 241 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SLC16A5O15375 505 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MPPED1O15442 326 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PEX1O43933 1283 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 UPK3AO75631 287 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 KRT36O76013 467 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 KLHL2O95198 593 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PIGNO95427 931 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SYNGR4O95473 234 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GOT2P00505 430 aaKnown RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GLAP06280 429 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SMIM18P0DKX4 95 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 TFPIP10646 304 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MSR1P21757 451 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BCKDHBP21953 392 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 FCARP24071 287 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PTGER4P35408 488 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MAGEA11P43364 429 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GPR4P46093 362 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 NOVP48745 357 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 NUMBP49757 651 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 TNFSF10P50591 281 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BCAP31P51572 246 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CCR4P51679 360 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BLVRAP53004 296 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CLDN15P56746 228 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 HERV-K104P63124 156 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MRPS15P82914 257 aaKnown RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BDH1Q02338 343 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 DMPKQ09013 629 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SLAQ13239 276 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 VEZF1Q14119 521 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 HERC3Q15034 1050 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 NCF4Q15080 339 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 P2RY14Q15391 338 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CAMK4Q16566 473 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PARP6Q2NL67 630 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 HKDC1Q2TB90 917 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 RNASE12Q5GAN4 147 aaKnown RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CLLU1OSQ5K130 101 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 LIPKQ5VXJ0 399 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 NKAIN2Q5VXU1 208 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 LCN10Q6JVE6 187 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF600Q6ZNG1 722 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 IL17RELQ6ZVW7 336 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 C16orf62Q7Z3J2 963 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 LIMS2Q7Z4I7 341 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 LUZP2Q86TE4 346 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 AMIGO1Q86WK6 493 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PAQR7Q86WK9 346 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CHSY1Q86X52 802 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CROCCP3Q8IVE0 287 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BMPERQ8N8U9 685 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 OR4K14Q8NGD5 310 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 KCNG3Q8TAE7 436 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF596Q8TC21 504 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GRHL3Q8TE85 626 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CCDC12Q8WUD4 166 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 UBTD2Q8WUN7 234 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PHYHIPQ92561 330 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MOCOSQ96EN8 888 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SENP5Q96HI0 755 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 MARK4Q96L34 752 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GPR137Q96N19 417 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 ZNF582Q96NG8 517 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CBWD1Q9BRT8 395 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 TRMT61BQ9BVS5 477 aaKnown RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 SSBP3Q9BWW4 388 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 STRADBQ9C0K7 418 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 KCNN2Q9H2S1 579 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 PPP1R3EQ9H7J1 279 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 GEMIN7Q9H840 131 aaKnown RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 LRRC4Q9HBW1 653 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 IL26Q9NPH9 171 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CHRAC1Q9NRG0 131 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 TXNDC16Q9P2K2 825 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 P2RX2Q9UBL9 471 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CD300AQ9UGN4 299 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 ERRFI1Q9UJM3 462 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-204ENST00000593977 CDH9Q9ULB4 789 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 TBC1D24Q9ULP9 559 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 RHBDD3Q9Y3P4 386 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 RNF115Q9Y4L5 304 aa3.85□□□□□ -1.79
LINC00649-204ENST00000593977 BZW2Q9Y6E2 419 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms