RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PATL1Q86TB9 770 aaKnown RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 CDRT4Q8N9R6 151 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 NFKBIDQ8NI38 313 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 ADAMTS15Q8TE58 950 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 XAGE5Q8WWM1 108 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 FKBP10Q96AY3 582 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 PYURFQ96I23 114 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 SLC46A1Q96NT5 459 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 TAAR9Q96RI9 348 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 MAGIXQ9H6Y5 334 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 ANKRA2Q9H9E1 313 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 BCL2L10Q9HD36 194 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 IFT80Q9P2H3 777 aaPredicted RBP12.54□□□□□ -0.4
VMP1-217ENST00000593168 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 AURKCQ9UQB9 309 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 NUP210LQ5VU65 1888 aa12.54□□□□□ -0.4
VMP1-217ENST00000593168 CCDC187A0A096LP49 1063 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 M0QX08 132 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 DYRK3O43781 588 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PDE9AO76083 593 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PRKD3O94806 890 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PGM3O95394 542 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 CBX7O95931 251 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 RAP2AP10114 183 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 ZNF28P17035 718 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 TNNI3P19429 210 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
VMP1-217ENST00000593168 MAP3K8P41279 467 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 CHRNB3Q05901 458 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
VMP1-217ENST00000593168 ELAVL1Q15717 326 aaKnown RBP12.53□□□□□ -0.4
VMP1-217ENST00000593168 NSDHLQ15738 373 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 MAPK11Q15759 364 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 NKG7Q16617 165 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
VMP1-217ENST00000593168 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 HEPHL1Q6MZM0 1159 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
VMP1-217ENST00000593168 PRICKLE2Q7Z3G6 844 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 SIMC1Q8NDZ2 872 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 OR7G1Q8NGA0 311 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 FBXO30Q8TB52 745 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 TSLPQ969D9 159 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 TMEM19Q96HH6 336 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 STACQ99469 402 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 YIPF4Q9BSR8 244 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 VN1R1Q9GZP7 353 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PIGUQ9H490 435 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 ADAP2Q9NPF8 381 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 DUSP22Q9NRW4 184 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 CALML5Q9NZT1 146 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 MKL2Q9ULH7 1088 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 PCDHGA3Q9Y5H0 932 aa12.53□□□□□ -0.4
VMP1-217ENST00000593168 UBR5O95071 2799 aaPredicted RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 TTC36A6NLP5 189 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 SUV39H1O43463 412 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 PRAMEF2O60811 474 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 BCHEP06276 602 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ALOX5P09917 674 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 NR2F1P10589 423 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 FCGR1AP12314 374 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ITIH1P19827 911 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ETV5P41161 510 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 EFNA3P52797 238 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 CRYBA2P53672 197 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 CRISP3P54108 245 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 SELENOWP63302 87 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 CLN3Q13286 438 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ATAD3BQ5T9A4 648 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ZNF517Q6ZMY9 492 aaPredicted RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 CCDC81Q6ZN84 652 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 TMEM151BQ8IW70 566 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 SLC16A11Q8NCK7 471 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 WDR36Q8NI36 951 aaKnown RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 DOK4Q8TEW6 326 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 PTPMT1Q8WUK0 201 aaPredicted RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 SLC35A4Q96G79 324 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 TRNT1Q96Q11 434 aaKnown RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 SEPHS2Q99611 448 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 LMF2Q9BU23 707 aaKnown RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 CHID1Q9BWS9 393 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 WDR54Q9H977 334 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 EQTNQ9NQ60 294 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 ADPRHL2Q9NX46 363 aa12.52□□□□□ -0.41
VMP1-217ENST00000593168 NXT1Q9UKK6 140 aaKnown RBP12.52□□□□□ -0.41
VMP1-217ENST00000593168 PCDHGB3Q9Y5G1 929 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms