RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ALPK1Q96QP1 1244 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 GPATCH1Q9BRR8 931 aaKnown RBP17.17■□□□□ 0.34
CCDC43-205ENST00000592333 TAS2R9Q9NYW1 312 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 HEY2Q9UBP5 337 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 CBLCQ9ULV8 474 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 DLGAP4Q9Y2H0 992 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 PCDH7O60245 1069 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 ERN1O75460 977 aaKnown RBP17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CT45A8P0DMV1 189 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CT45A9P0DMV2 189 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 PCSK2P16519 638 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 DNASE1P24855 282 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 HMOX2P30519 316 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 KRT20P35900 424 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 GFRA1P56159 465 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 DUSP2Q05923 314 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 LCP2Q13094 533 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 BCL2A1Q16548 175 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CT45A2Q5DJT8 189 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 DCST1Q5T197 706 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 YRDCQ86U90 279 aaKnown RBP17.16■□□□□ 0.34
CCDC43-205ENST00000592333 IFNEQ86WN2 208 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CDC20BQ86Y33 519 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CCDC116Q8IYX3 515 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 MMP21Q8N119 569 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 OR14L1PQ8NHC6 308 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CCDC126Q96EE4 140 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 EPB41L4BQ9H329 900 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 SLC35C2Q9NQQ7 365 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 CCM2LQ9NUG4 571 aaPredicted RBP17.16■□□□□ 0.34
CCDC43-205ENST00000592333 TMEM216Q9P0N5 145 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 WIF1Q9Y5W5 379 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 NF1P21359 2839 aa17.16■□□□□ 0.34
CCDC43-205ENST00000592333 GNG14A0A1W2PPG7 69 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 KDM4EB2RXH2 506 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-205ENST00000592333 DLX3O60479 287 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TSPAN2O60636 221 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 REM1O75628 298 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 IL3P08700 152 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TMIGD3P0DMS9 266 aaPredicted RBP17.15■□□□□ 0.34
CCDC43-205ENST00000592333 CD99P14209 185 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TSPAN8P19075 237 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TACR1P25103 407 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TIA1P31483 386 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC43-205ENST00000592333 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
CCDC43-205ENST00000592333 NNATQ16517 81 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TGIF2LYQ8IUE0 185 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TMBIM1Q969X1 311 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 VSTM2LQ96N03 204 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TMEM237Q96Q45 408 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 ACPTQ9BZG2 426 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 PIGMQ9H3S5 423 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 GALNT9Q9HCQ5 603 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 SERHLQ9NQF3 203 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 PFDN4Q9NQP4 134 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TAS2R10Q9NYW0 307 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 TAS2R7Q9NYW3 318 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 DCDC2Q9UHG0 476 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 GRID1Q9ULK0 1009 aa17.15■□□□□ 0.34
CCDC43-205ENST00000592333 ZFHX3Q15911 3703 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 A0A087WV62 115 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 CRHP06850 196 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 IFI6P09912 130 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 GCAP28676 217 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 DGKQP52824 942 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 RAE1P78406 368 aaKnown RBP17.14■□□□□ 0.33
CCDC43-205ENST00000592333 LTB4RQ15722 352 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 TRIM42Q8IWZ5 723 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 HOMEZQ8IX15 550 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 FAM9CQ8IZT9 166 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 SIMC1Q8NDZ2 872 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 C16orf78Q8WTQ4 265 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 NRGNQ92686 78 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 METTL2AQ96IZ6 378 aaKnown RBP17.14■□□□□ 0.33
CCDC43-205ENST00000592333 DACH2Q96NX9 599 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 HBEGFQ99075 208 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 TUBA1CQ9BQE3 449 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 MAPRE3Q9UPY8 281 aa17.14■□□□□ 0.33
CCDC43-205ENST00000592333 H0Y3Z8 333 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 LINC01387J3KSC0 135 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 KIF2AO00139 706 aaPredicted RBP17.13■□□□□ 0.33
CCDC43-205ENST00000592333 COQ9O75208 318 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 FOSL1P15407 271 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 ZNF708P17019 499 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 DDCP20711 480 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 IL12BP29460 328 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 WNT3P56703 355 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 CYP27C1Q4G0S4 372 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 LARP4Q71RC2 724 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC43-205ENST00000592333 IFT20Q8IY31 132 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 C9orf106Q8NAJ2 232 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 OR9A2Q8NGT5 310 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 ADOQ96SZ5 270 aa17.13■□□□□ 0.33
CCDC43-205ENST00000592333 DOCK7Q96N67 2140 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 EEF1E1-BLOC1S5C9J1V9 151 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 EEF1E1O43324 174 aaKnown RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 RIPK2O43353 540 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 SLCO1A2P46721 670 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms