RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZFPM2Q8WW38 1151 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 THAP4Q8WY91 577 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 MVB12BQ9H7P6 319 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 TAS2R3Q9NYW6 316 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 NOSIPQ9Y314 301 aaKnown RBP14.32□□□□□ -0.12
CIRBP-228ENST00000590347 RAMP2O60895 175 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 HOXB8P17481 243 aaPredicted RBP14.32□□□□□ -0.12
CIRBP-228ENST00000590347 ATP6V1E1P36543 226 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 RECQLP46063 649 aaPredicted RBP14.32□□□□□ -0.12
CIRBP-228ENST00000590347 TLE2Q04725 743 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 ZNF33AQ06730 810 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SGCAQ16586 387 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 GUCA2BQ16661 112 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SLC36A2Q495M3 483 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 C9orf152Q5JTZ5 239 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 C17orf99Q6UX52 265 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 MNTQ99583 582 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 FUZQ9BT04 418 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 OR51B5Q9H339 312 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 TDP1Q9NUW8 608 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 C14orf105Q9NVL8 296 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SLC39A1Q9NY26 324 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 ABHD14A-ACY1A0A1B0GW23 586 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 POM121BA6NF01 834 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 C2orf81A6NN90 581 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 POP7O75817 140 aaKnown RBP14.32□□□□□ -0.12
CIRBP-228ENST00000590347 HMGN1P05114 100 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 CSNK1DP48730 415 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SNRPEP62304 92 aaKnown RBP14.32□□□□□ -0.12
CIRBP-228ENST00000590347 SLC25A35Q3KQZ1 300 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 LRRN1Q6UXK5 716 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 ALKAL1Q6UXT8 129 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 LINGO4Q6UY18 593 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 RPLP0P6Q8NHW5 317 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 HGDQ93099 445 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 EGLN3Q9H6Z9 239 aa14.32□□□□□ -0.12
CIRBP-228ENST00000590347 GNG14A0A1W2PPG7 69 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ARPC1BO15143 372 aaKnown RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 WDPCPO95876 746 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ECDO95905 644 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ANXA7P20073 488 aaKnown RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 PVALBP20472 110 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 CD52P31358 61 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 FKBP1BP68106 108 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 TWF1Q12792 350 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 PIN1Q13526 163 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 MZT2AQ6P582 158 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 WDR77Q9BQA1 342 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 TMEM45AQ9NWC5 275 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 CSNK1G3Q9Y6M4 447 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 C6orf47O95873 294 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 AMD1P17707 334 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ACHEP22303 614 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 NFYAP23511 347 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 PITPNBP48739 271 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 GPR15P49685 360 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 BEX5Q5H9J7 111 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 KIAA1211LQ6NV74 962 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 FBXL22Q6P050 247 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 HDDC3Q8N4P3 179 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ING5Q8WYH8 240 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 ZNF582Q96NG8 517 aaPredicted RBP14.31□□□□□ -0.12
CIRBP-228ENST00000590347 GINS4Q9BRT9 223 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 SLC6A20Q9NP91 592 aa14.31□□□□□ -0.12
CIRBP-228ENST00000590347 TRABD2BA6NFA1 517 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 D6RAR5 112 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 TXNL1O43396 289 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PTAFRP25105 342 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 XCR1P46094 333 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 HBA1P69905 142 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 RAB41Q5JT25 222 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 TNFAIP8L2Q6P589 184 aaPredicted RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PDZD9Q8IXQ8 264 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 KRT78Q8N1N4 520 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 SFT2D1Q8WV19 159 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 RAB8BQ92930 207 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 BABAM2Q9NXR7 383 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PURGQ9UJV8 347 aaKnown RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 ZC3H12DA2A288 527 aaKnown RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 DISC1C4P0D8 188 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 LIMS3P0CW19 117 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 LIMS4P0CW20 117 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 OSMP13725 252 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 SELLP14151 372 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 SNRPBP14678 240 aaKnown RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PTX3P26022 381 aaPredicted RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 SLC6A4P31645 630 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PXNP49023 591 aaPredicted RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 ALDH9A1P49189 494 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 TTPAP49638 278 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 CRYBB1P53674 252 aaPredicted RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PRKCZQ05513 592 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 SNTB2Q13425 540 aaKnown RBP14.3□□□□□ -0.12
CIRBP-228ENST00000590347 ZNF385BQ569K4 471 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 PABPC1L2AQ5JQF8 200 aa14.3□□□□□ -0.12
CIRBP-228ENST00000590347 OXR1Q8N573 874 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms