RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 C9orf106Q8NAJ2 232 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 RDH11Q8TC12 318 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 ZNF675Q8TD23 568 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 KAT2AQ92830 837 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 ERP27Q96DN0 273 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 OR2B2Q9GZK3 357 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 CXXC4Q9H2H0 198 aa16.33■□□□□ 0.2
PRKCSH-211ENST00000590098 CCDC151A5D8V7 595 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 DLX3O60479 287 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ERN1O75460 977 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 EPXP11678 715 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 CHN1P15882 459 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 IMPDH1P20839 514 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ATP5F1P24539 256 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 PPP2R2AP63151 447 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 PSPHP78330 225 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 SORDQ00796 357 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 HMGCS1Q01581 520 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ACSM2AQ08AH3 577 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 EFR3AQ14156 821 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 CEBPEQ15744 281 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 FAM219BQ5XKK7 198 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ACSM2BQ68CK6 577 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 PLCZ1Q86YW0 608 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 SLC22A9Q8IVM8 553 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 OR9A2Q8NGT5 310 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 BTBD9Q96Q07 612 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 TMEM237Q96Q45 408 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ADOQ96SZ5 270 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 TM9SF2Q99805 663 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 TUBA1CQ9BQE3 449 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ACPTQ9BZG2 426 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 TAS2R10Q9NYW0 307 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 SENP1Q9P0U3 644 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 PLEKHA6Q9Y2H5 1048 aa16.32■□□□□ 0.2
PRKCSH-211ENST00000590098 ACANP16112 2415 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 MED12LQ86YW9 2145 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 ABHD2P08910 425 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 IL12BP29460 328 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 MPIP34949 423 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 PKNOX1P55347 436 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 RAE1P78406 368 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 LCP2Q13094 533 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 AAGABQ6PD74 315 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 SCIMPQ6UWF3 145 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 TGIF2LYQ8IUE0 185 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 C16orf78Q8WTQ4 265 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 SLC35A4Q96G79 324 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 TMUB1Q9BVT8 246 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 ANKRA2Q9H9E1 313 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 JKAMPQ9P055 326 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 WIF1Q9Y5W5 379 aa16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 ZNF469Q96JG9 3925 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 FLNAP21333 2647 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-211ENST00000590098 DIAPH2O60879 1101 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 RCBTB2O95199 551 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 ENO1P06733 434 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 CT45A8P0DMV1 189 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 CT45A9P0DMV2 189 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 SRD5A2P31213 254 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 SLCO1A2P46721 670 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 PRKAA2P54646 552 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 CORO7P57737 925 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 MRPS22P82650 360 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 BTKQ06187 659 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 CT45A2Q5DJT8 189 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 LARP4Q71RC2 724 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 FAM9CQ8IZT9 166 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 LINC01560Q8TB33 94 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 WNT2BQ93097 391 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 APIPQ96GX9 242 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 VSTM2LQ96N03 204 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 BBS4Q96RK4 519 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 SFXN3Q9BWM7 321 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 RBM24Q9BX46 236 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 FOLH1BQ9HBA9 442 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 TAS2R9Q9NYW1 312 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 DKKL1Q9UK85 242 aa16.3■□□□□ 0.2
PRKCSH-211ENST00000590098 CLCA1A8K7I4 914 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 PLOD3O60568 738 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 TSPAN2O60636 221 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 NME6O75414 186 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 ANXA4P09525 319 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 GCAP28676 217 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 TIA1P31483 386 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 GSTM5P46439 218 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 CPA2P48052 419 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 HTR6P50406 440 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 GFRA1P56159 465 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 EEF1A1P68104 462 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 FOXF2Q12947 444 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 SPDYAQ5MJ70 313 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 EEF1A1P5Q5VTE0 462 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 OR5M10Q6IEU7 315 aa16.29■□□□□ 0.2
PRKCSH-211ENST00000590098 CAMKMTQ7Z624 323 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms