RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MPP4Q96JB8 637 aa23■■□□□ 1.27
RFX1-205ENST00000589239 LPAR4Q99677 370 aa23■■□□□ 1.27
RFX1-205ENST00000589239 NUDT9Q9BW91 350 aa23■■□□□ 1.27
RFX1-205ENST00000589239 MRPS18BQ9Y676 258 aaKnown RBP23■■□□□ 1.27
RFX1-205ENST00000589239 KCNE3Q9Y6H6 103 aa23■■□□□ 1.27
RFX1-205ENST00000589239 ACOT8O14734 319 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 BCAS2O75934 225 aaPredicted RBP22.99■■□□□ 1.27
RFX1-205ENST00000589239 MMP11P24347 488 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 CHN2P52757 468 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 ZNF155Q12901 538 aaPredicted RBP22.99■■□□□ 1.27
RFX1-205ENST00000589239 BNIP2Q12982 314 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 PUM1Q14671 1186 aaKnown RBP eCLIP22.99■■□□□ 1.27
RFX1-205ENST00000589239 VMACQ2NL98 169 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 CDC73Q6P1J9 531 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 PTRH1Q86Y79 214 aaKnown RBP22.99■■□□□ 1.27
RFX1-205ENST00000589239 OR7G1Q8NGA0 311 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 OR1N1Q8NGS0 311 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 ADAMTS15Q8TE58 950 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 FAM122AQ96E09 287 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 LOC102723996A0A087X1L8 192 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 ACP2P11117 423 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 MAGEA8P43361 318 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 FXNQ16595 210 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 SLC44A2Q8IWA5 706 aaPredicted RBP22.99■■□□□ 1.27
RFX1-205ENST00000589239 LGI4Q8N135 537 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 CDRT4Q8N9R6 151 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 MORN4Q8NDC4 146 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 VSTM2LQ96N03 204 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 SCNM1Q9BWG6 230 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 SPATA9Q9BWV2 254 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 TMEM38AQ9H6F2 299 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 FOLH1BQ9HBA9 442 aa22.99■■□□□ 1.27
RFX1-205ENST00000589239 GPR143P51810 404 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 FLOT2Q14254 428 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 PDK3Q15120 406 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 DUSP5Q16690 384 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 KIRREL2Q6UWL6 708 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 CYP2R1Q6VVX0 501 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 RNF111Q6ZNA4 994 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 C11orf65Q8NCR3 313 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 NFAM1Q8NET5 270 aaPredicted RBP22.98■■□□□ 1.27
RFX1-205ENST00000589239 B3GNT7Q8NFL0 401 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 FIG4Q92562 907 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 NCLNQ969V3 563 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 SLC35A4Q96G79 324 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 ART5Q96L15 291 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 BTBD9Q96Q07 612 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 WDR70Q9NW82 654 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 COPS7AQ9UBW8 275 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 IL17BQ9UHF5 180 aa22.98■■□□□ 1.27
RFX1-205ENST00000589239 PRAMEF27A3QJZ7 478 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 ARPC2O15144 300 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 OTX2P32243 289 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 AQP4P55087 323 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 ZCCHC12Q6PEW1 402 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 HIPK4Q8NE63 616 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 TNIP2Q8NFZ5 429 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 NFKBIDQ8NI38 313 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 NXPE2Q96DL1 559 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 SNX13Q9Y5W8 968 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 SOCS6O14544 535 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 GSTA4O15217 222 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 GGT1P19440 569 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 ANXA11P50995 505 aaKnown RBP22.97■■□□□ 1.27
RFX1-205ENST00000589239 PSG6Q00889 435 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 SSPNQ14714 243 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 PCOLCEQ15113 449 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 EXOSC6Q5RKV6 272 aaKnown RBP22.97■■□□□ 1.27
RFX1-205ENST00000589239 GLYATQ6IB77 296 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 ERICH5Q6P6B1 374 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 UGT2A3Q6UWM9 527 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 APCDD1LQ8NCL9 501 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 SLC38A5Q8WUX1 472 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 PYDC1Q8WXC3 89 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 CDS1Q92903 461 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 NMD3Q96D46 503 aaKnown RBP22.97■■□□□ 1.27
RFX1-205ENST00000589239 ITPAQ9BY32 194 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 WASF3Q9UPY6 502 aa22.97■■□□□ 1.27
RFX1-205ENST00000589239 IGHV1-45A0A0A0MS14 117 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 ASNA1O43681 348 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 PRKNO60260 465 aaPredicted RBP22.96■■□□□ 1.27
RFX1-205ENST00000589239 IGHEP01854 428 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 BCHEP06276 602 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 TFPTP0C1Z6 253 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 ARAFP10398 606 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 LIPCP11150 499 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 COX6A1P12074 109 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 MAP3K8P41279 467 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 CDK6Q00534 326 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 TRAP1Q12931 704 aaKnown RBP22.96■■□□□ 1.27
RFX1-205ENST00000589239 IL10RAQ13651 578 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 SCARB2Q14108 478 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 PPP1R32Q7Z5V6 425 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 DHFR2Q86XF0 187 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 A4GALTQ9NPC4 353 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 PRODH2Q9UF12 536 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 KCND3Q9UK17 655 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 ZFHX4Q86UP3 3567 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 DUXAA6NLW8 204 aa22.96■■□□□ 1.27
RFX1-205ENST00000589239 CXCR6O00574 342 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms