RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 NCF4Q15080 339 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 MAPK11Q15759 364 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 RPS26P11Q5JNZ5 115 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 FAM198BQ6UWH4 519 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 EIF3MQ7L2H7 374 aaKnown RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 ANKRD37Q7Z713 158 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 KRT73Q86Y46 540 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 FAM86B1Q8N7N1 296 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 COX18Q8N8Q8 333 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 BBS10Q8TAM1 723 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 SLC2A12Q8TD20 617 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 SLC47A1Q96FL8 570 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 TRNT1Q96Q11 434 aaKnown RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 STOML1Q9UBI4 398 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 A8MVJ9 347 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 RAP2AP10114 183 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 GABRA3P34903 492 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 FUT5Q11128 374 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 SFT2D3Q587I9 215 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 EXOSC6Q5RKV6 272 aaKnown RBP20.7■□□□□ 0.9
ATG4D-209ENST00000588857 PRAMEF8Q5VWM4 474 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 PRAMEF7Q5VXH5 474 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 HEPHL1Q6MZM0 1159 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 ZNF615Q8N8J6 731 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 LZICQ8WZA0 190 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 TPD52L3Q96J77 140 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 LMF2Q9BU23 707 aaKnown RBP20.7■□□□□ 0.9
ATG4D-209ENST00000588857 MAGIXQ9H6Y5 334 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 YY1AP1Q9H869 796 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 BCL2L10Q9HD36 194 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 C6orf203Q9P0P8 240 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-209ENST00000588857 COPS7AQ9UBW8 275 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 C19orf25Q9UFG5 118 aaPredicted RBP20.7■□□□□ 0.9
ATG4D-209ENST00000588857 MSRB2Q9Y3D2 182 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 SDK2Q58EX2 2172 aa20.7■□□□□ 0.9
ATG4D-209ENST00000588857 A0A0G2JPF8 293 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 HNRNPCL2B2RXH8 293 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 HNRNPCL3B7ZW38 293 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 BRINP1O60477 761 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 SERPINB7O75635 380 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 TNFSF15O95150 251 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 H6PDO95479 791 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 DDAH2O95865 285 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 HNRNPCL4P0DMR1 293 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 MAP3K8P41279 467 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 CRYBA2P53672 197 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 RNF111Q6ZNA4 994 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 FKBP9P1Q75LS8 142 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 PQLC1Q8N2U9 271 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 MORN4Q8NDC4 146 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 PAPD5Q8NDF8 572 aaKnown RBP20.69■□□□□ 0.9
ATG4D-209ENST00000588857 OR10Q1Q8NGQ4 319 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 C16orf52Q8NHV5 167 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 HOXB13Q92826 284 aaPredicted RBP20.69■□□□□ 0.9
ATG4D-209ENST00000588857 TAMM41Q96BW9 452 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 VSTM2LQ96N03 204 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 CFL2Q9Y281 166 aa20.69■□□□□ 0.9
ATG4D-209ENST00000588857 PTPRBP23467 1997 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 TTC36A6NLP5 189 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 TPST1O60507 370 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 TIPRLO75663 272 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 DLGAP3O95886 979 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 AK1P00568 194 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 OPN1SWP03999 348 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 CHRM4P08173 479 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 FCGR1AP12314 374 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 SLC37A1P57057 533 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 SELENOWP63302 87 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 ARHGAP11BQ3KRB8 267 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 TMPRSS7Q7RTY8 843 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 FAM110BQ8TC76 370 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 ZNF721Q8TF20 911 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 HSH2DQ96JZ2 352 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 SLC46A1Q96NT5 459 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 DOHHQ9BU89 302 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 SPATA5L1Q9BVQ7 753 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 CHID1Q9BWS9 393 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 FOXJ2Q9P0K8 574 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 PTRH2Q9Y3E5 179 aaKnown RBP20.68■□□□□ 0.9
ATG4D-209ENST00000588857 ACACBO00763 2458 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 FAM149AA5PLN7 773 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 NKX2-2O95096 273 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 CLPSP04118 112 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 POU6F2P78424 691 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-209ENST00000588857 LRRC74BQ6ZQY2 392 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 ARMC8Q8IUR7 673 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 PIK3R3Q92569 461 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 COL21A1Q96P44 957 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 BTBD2Q9BX70 525 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 SPRY4Q9C004 299 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 B3GNT4Q9C0J1 378 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 RUBCNLQ9H714 662 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 PADI2Q9Y2J8 665 aa20.68■□□□□ 0.9
ATG4D-209ENST00000588857 CEP295Q9C0D2 2601 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 NINQ8N4C6 2090 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 IGKV3-11P04433 115 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 ETS2P15036 469 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 FASP25445 335 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 DCST2Q5T1A1 773 aa20.67■□□□□ 0.9
ATG4D-209ENST00000588857 TMEM205Q6UW68 189 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms