RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 FHL5Q5TD97 284 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 FAM111BQ6SJ93 734 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 KLHL17Q6TDP4 642 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 DGLUCYQ7Z3D6 616 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 CCDC71Q8IV32 467 aaPredicted RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 CARFQ8N187 725 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 OR6C4Q8NGE1 309 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 OR4D11Q8NGI4 311 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 OR52P1PQ8NH57 321 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 C9orf43Q8TAL5 461 aaPredicted RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 TRUB1Q8WWH5 349 aaKnown RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 SLC38A4Q969I6 547 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 CLDN23Q96B33 292 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 Q96MT0 163 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 SCN2AQ99250 2005 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 FOXQ1Q9C009 403 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 LHPPQ9H008 270 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 RAB33BQ9H082 229 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 GPN2Q9H9Y4 310 aaPredicted RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 POLE3Q9NRF9 147 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 DUSP22Q9NRW4 184 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 RASSF1Q9NS23 344 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 ERVK-18Q9QC07 812 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 RHCGQ9UBD6 479 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 FTSJ1Q9UET6 329 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 CDC14AQ9UNH5 594 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 PLCL2Q9UPR0 1127 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 MRPS2Q9Y399 296 aaKnown RBP10.54□□□□□ -0.72
LIG3-204ENST00000585740 PCDHGA10Q9Y5H3 936 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 CACNA1IQ9P0X4 2223 aa10.54□□□□□ -0.72
LIG3-204ENST00000585740 A0A1W2PS29 197 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 MED19A0JLT2 244 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 EFCAB10A6NFE3 127 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 TLCD2A6NGC4 264 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF860A6NHJ4 632 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SLC9B1P1A6NJY1 282 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 H3BMQ9 156 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 AP3D1O14617 1153 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 NME6O75414 186 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 MT-ND2P03891 347 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 GUSBP08236 651 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SLC35E2P0CK97 266 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 GABRB1P18505 474 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 CHMP24386 653 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 CTSKP43235 329 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 IDH2P48735 452 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 EMP3P54852 163 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 C21orf59P57076 290 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 TAS2R41P59536 307 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 OLR1P78380 273 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 ST3GAL3Q11203 375 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 FAM53BQ14153 422 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 PTGES3Q15185 160 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 INAVAQ3KP66 663 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 C14orf28Q4W4Y0 310 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 WDR45BQ5MNZ6 344 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 EXOSC6Q5RKV6 272 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 C6orf132Q5T0Z8 1188 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SYT6Q5T7P8 510 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 SLX4IPQ5VYV7 408 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 PGBD2Q6P3X8 592 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 FRRS1Q6ZNA5 592 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF761Q86XN6 746 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 ANKRD13BQ86YJ7 626 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 LACC1Q8IV20 430 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SFTPA2Q8IWL1 248 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF595Q8IYB9 648 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 C7orf57Q8NEG2 295 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 OR6T1Q8NGN1 323 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 GNPDA2Q8TDQ7 276 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 FAR1Q8WVX9 515 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SLC9A6Q92581 669 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 COG8Q96MW5 612 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF285Q96NJ3 590 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 MIR1-1HGQ9H1L0 117 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ARMC7Q9H6L4 198 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 TBC1D17Q9HA65 648 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 SLC24A3Q9HC58 644 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 FKBP14Q9NWM8 211 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 CLN6Q9NWW5 311 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF226Q9NYT6 803 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 CNOT2Q9NZN8 540 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 WARS2Q9UGM6 360 aaKnown RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 NDOR1Q9UHB4 597 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 PSORS1C1Q9UIG5 152 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 ZNF443Q9Y2A4 671 aaPredicted RBP10.53□□□□□ -0.72
LIG3-204ENST00000585740 WDR45Q9Y484 360 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 KCNE3Q9Y6H6 103 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 GVINP1Q7Z2Y8 2422 aa10.53□□□□□ -0.72
LIG3-204ENST00000585740 HYKKA2RU49 373 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 TTC36A6NLP5 189 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 CLCA1A8K7I4 914 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 RHPN2P1A8MT19 583 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SGK494L7N484 410 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms