RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 KCNE2Q9Y6J6 123 aa4.78□□□□□ -1.64
CRLF3-206ENST00000585268 VPS13AQ96RL7 3174 aa4.78□□□□□ -1.64
CRLF3-206ENST00000585268 SDK2Q58EX2 2172 aa4.78□□□□□ -1.64
CRLF3-206ENST00000585268 A0A0A6YYC8 382 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 IQANK1A0A1B0GTG1 560 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TRBC2A0A5B9 178 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SYCE1LA8MT33 242 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 C4orf51C9J302 202 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 C9J4A7 227 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 I3L1I5 382 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 K7EPI3 171 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CLGNO14967 610 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 KLK8O60259 260 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 DNAJB6O75190 326 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 KLF7O75840 302 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SIX3O95343 332 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SERPIND1P05546 499 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 UMODP07911 640 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CD63P08962 238 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RBP1P09455 135 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 GFAPP14136 432 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 IL1RNP18510 177 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 GNAZP19086 355 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SERPINB3P29508 390 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CPA2P48052 419 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RPS15AP62244 130 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RPS15P62841 145 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 MAT1AQ00266 395 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 REEP5Q00765 189 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CDC20Q12834 499 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CDC16Q13042 620 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CHIT1Q13231 466 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CBFBQ13951 182 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 DOC2AQ14183 400 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 NCF4Q15080 339 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PDK4Q16654 411 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SYT16Q17RD7 645 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 DEFB109BQ30KR1 87 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 LINC00303Q3SY05 128 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 XKR6Q5GH73 641 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 LGSNQ5TDP6 509 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 FAM219BQ5XKK7 198 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ATG9BQ674R7 924 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ADNP2Q6IQ32 1131 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF474Q6S9Z5 364 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF793Q6ZN11 406 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SHISA6Q6ZSJ9 500 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 SH2D5Q6ZV89 423 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RPS27LQ71UM5 84 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PRSS41Q7RTY9 318 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 LRRC70Q7Z2Q7 622 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ASPGQ86U10 573 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TDRPQ86YL5 185 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PRSS58Q8IYP2 241 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TCAIMQ8N3R3 496 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TEX9Q8N6V9 391 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PTGR2Q8N8N7 351 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 AMER3Q8N944 861 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 MFSD9Q8NBP5 474 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 OR9A4Q8NGU2 314 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZCCHC10Q8TBK6 192 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 BCAS4Q8TDM0 211 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 UBTD2Q8WUN7 234 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PMM1Q92871 262 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RERGQ96A58 199 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZBTB9Q96C00 473 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 MTBPQ96DY7 904 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PHF21BQ96EK2 531 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 FAR2Q96K12 515 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CCDC77Q9BR77 488 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CAPS2Q9BXY5 557 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF700Q9H0M5 742 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 KLHL31Q9H511 634 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CNOT10Q9H9A5 744 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF304Q9HCX3 659 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 TMEM216Q9P0N5 145 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 OPTCQ9UBM4 332 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 CTSFQ9UBX1 484 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 KCND3Q9UK17 655 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 RAB21Q9UL25 225 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF490Q9ULM2 529 aaPredicted RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 B3GNT3Q9Y2A9 372 aa4.77□□□□□ -1.65
CRLF3-206ENST00000585268 PTRH2Q9Y3E5 179 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
CRLF3-206ENST00000585268 A0A0G2JN53 185 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 ZNF860A6NHJ4 632 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 AQP12BA6NM10 295 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 A8MT66 165 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 SGK494L7N484 410 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 E2F3O00716 465 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 TXNDC9O14530 226 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 NDUFS4O43181 175 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 ASNA1O43681 348 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 SH3BGRLO75368 114 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 JRKO75564 520 aa4.76□□□□□ -1.65
CRLF3-206ENST00000585268 TBX6O95947 436 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms