RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MEPCEQ7L2J0 689 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NANOGNBQ7Z5D8 188 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CTAGE6Q86UF2 777 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CTAGE4Q8IX94 777 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AQP12AQ8IXF9 295 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TBC1D19Q8N5T2 526 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OR2T34Q8NGX1 318 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GANCQ8TET4 914 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PINX1Q96BK5 328 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SGF29Q96ES7 293 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MED30Q96HR3 178 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CPB2Q96IY4 423 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 APOLD1Q96LR9 279 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 C3orf30Q96M34 536 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RANBP9Q96S59 729 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NPY6RQ99463 290 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NDNQ99608 321 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OLFM1Q99784 485 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 WDR83Q9BRX9 315 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CCM2Q9BSQ5 444 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NUSAP1Q9BXS6 441 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM192AQ9GZU8 254 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MARCH7Q9H992 704 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SEBOXQ9HB31 216 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ASIC5Q9NY37 505 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 WRAP73Q9P2S5 460 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EPHA6Q9UF33 1036 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC7A7Q9UM01 511 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 HS3ST2Q9Y278 367 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PPIL1Q9Y3C6 166 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TMED3Q9Y3Q3 217 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CLCA3PQ9Y6N3 262 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ADAMTS9Q9P2N4 1935 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FBN2P35556 2912 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 C15orf38-AP3S2A0A0A6YYH1 394 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM47DPA6NHR8 397 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CBY3A6NI87 242 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 HEPACAM2A8MVW5 462 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 C2CD4DB7Z1M9 353 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ANKRD63C9JTQ0 380 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SPECC1L-ADORA2AF8WAN1 911 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 GOLGA8MH3BSY2 632 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 M0QYV0 167 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LGALS8O00214 317 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TXNDC9O14530 226 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 KDELR3O43731 214 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ALPLP05186 524 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TPBGLP0DKB5 382 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 PSG1P11464 419 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CCDC130P13994 396 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 AHCYP23526 432 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RGS7P49802 495 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 NAGLUP54802 743 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SSTP61278 116 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC3A1Q07837 685 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 C17orf67Q0P5P2 114 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 KIF5AQ12840 1032 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RIPK1Q13546 671 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ITGA9Q13797 1035 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ITIH4Q14624 930 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RCN1Q15293 331 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ODF4Q2M2E3 257 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF542PQ5EBM4 170 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SEL1L2Q5TEA6 688 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LCN1P1Q5VSP4 162 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 NSUN5P2Q63ZY6 315 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FRG2Q64ET8 278 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 WSCD1Q658N2 575 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 DCUN1D2Q6PH85 259 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ARSKQ6UWY0 536 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CD300LGQ6UXG3 332 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM74Q86UV6 250 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM73Q86UV7 250 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 VSTM4Q8IW00 320 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 KATNAL2Q8IYT4 538 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CENPLQ8N0S6 344 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CENPSQ8N2Z9 138 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TSTD1Q8NFU3 115 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 OR4K1Q8NGD4 311 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 OIT3Q8WWZ8 545 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF606Q8WXB4 792 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FIG4Q92562 907 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 NR4A3Q92570 626 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 DAZLQ92904 295 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 PHF21AQ96BD5 680 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 RTP4Q96DX8 246 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 TMA16Q96EY4 203 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FOPNLQ96NB1 174 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 LYSMD1Q96S90 227 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 FEVQ99581 238 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 GANQ9H2C0 597 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 EVA1AQ9H8M9 152 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ECT2Q9H8V3 914 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 CD93Q9NPY3 652 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 GSN-AS1Q9NRJ2 163 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 ADAM22Q9P0K1 906 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHL8Q9P2G9 620 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 SIX4Q9UIU6 781 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 GINS2Q9Y248 185 aa1.77□□□□□ -2.13
SMCHD1-211ENST00000584897 MAD1L1Q9Y6D9 718 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms