RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PDPK1O15530 556 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 HNRNPRO43390 633 aaKnown RBP18.69■□□□□ 0.58
SS18-224ENST00000584083 ACVR2AP27037 513 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 IL12BP29460 328 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 PMPCAQ10713 525 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 CDSNQ15517 529 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 SLC30A6Q6NXT4 461 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 ANGPTL8Q6UXH0 198 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 RPRMLQ8N4K4 120 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 MARVELD2Q8N4S9 558 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 OR1J4Q8NGS1 313 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 NEIL3Q8TAT5 605 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 CA5BP1Q8WTZ4 195 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 RND1Q92730 232 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 TMCO6Q96DC7 493 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 TMEM41AQ96HV5 264 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 PPP3R2Q96LZ3 170 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 ADOQ96SZ5 270 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 OSBPL11Q9BXB4 747 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 SH3BP4Q9P0V3 963 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 ZDHHC2Q9UIJ5 367 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 C15orf41Q9Y2V0 281 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 CELSR2Q9HCU4 2923 aa18.69■□□□□ 0.58
SS18-224ENST00000584083 C2orf72A6NCS6 295 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 PRAMEF25A6NGN4 478 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 PLOD2O00469 737 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 ABCB7O75027 752 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 ICOSLGO75144 302 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 PEX11AO75192 247 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 SKAP2O75563 359 aaPredicted RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 HSPA4LO95757 839 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 MYZAPP0CAP1 466 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 ENDOUP21128 410 aaKnown RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 ELAVL4P26378 380 aaKnown RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 ARRB2P32121 409 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 GPC1P35052 558 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 ASMTP46597 345 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 PSPHP78330 225 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 HSPB3Q12988 150 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 FNDC7Q5VTL7 733 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 TIGD3Q6B0B8 471 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 NPSR1Q6W5P4 371 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 LARP4Q71RC2 724 aaKnown RBP eCLIP18.68■□□□□ 0.58
SS18-224ENST00000584083 ZNF551Q7Z340 670 aaPredicted RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 CROCCP2Q86T23 111 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 MARVELD3Q96A59 401 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 CIDECQ96AQ7 238 aaPredicted RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 ELP4Q96EB1 424 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 GALNT9Q9HCQ5 603 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 SSU72Q9NP77 194 aaKnown RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 KCNK9Q9NPC2 374 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 GIMAP2Q9UG22 337 aa18.68■□□□□ 0.58
SS18-224ENST00000584083 C19orf53Q9UNZ5 99 aaPredicted RBP18.68■□□□□ 0.58
SS18-224ENST00000584083 C15orf38-AP3S2A0A0A6YYH1 394 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 TMEM114B3SHH9 223 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 UPK1AO00322 258 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 TSPAN2O60636 221 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 BCKDHAP12694 445 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 MAPK1P28482 360 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 CDK9P50750 372 aaKnown RBP18.67■□□□□ 0.58
SS18-224ENST00000584083 NUP107P57740 925 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 SNTA1Q13424 505 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 EFR3AQ14156 821 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 CHI3L2Q15782 390 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 TMEM81Q6P7N7 255 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 ACAD11Q709F0 780 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 OR4N2Q8NGD1 307 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 OR6Y1Q8NGX8 325 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 ZFP28Q8NHY6 868 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 SLC35A4Q96G79 324 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 RUBCNLQ9H714 662 aa18.67■□□□□ 0.58
SS18-224ENST00000584083 ARHGAP21Q5T5U3 1957 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 TM9SF1O15321 606 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 BIRC5O15392 142 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 WDR1O75083 606 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 PTGDSP41222 190 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 MRPS22P82650 360 aaKnown RBP18.66■□□□□ 0.58
SS18-224ENST00000584083 ZNHIT3Q15649 155 aaPredicted RBP18.66■□□□□ 0.58
SS18-224ENST00000584083 ATP6AP1LQ52LC2 224 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 ZNF385BQ569K4 471 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 XKR7Q5GH72 579 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 B3GNT6Q6ZMB0 384 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 OR2L13Q8N349 312 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 OR10Q1Q8NGQ4 319 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 ASB5Q8WWX0 329 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 EFHD2Q96C19 240 aaPredicted RBP18.66■□□□□ 0.58
SS18-224ENST00000584083 NTNG2Q96CW9 530 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 ZBED6CLQ96FA7 236 aaPredicted RBP18.66■□□□□ 0.58
SS18-224ENST00000584083 ZNF764Q96H86 408 aaPredicted RBP18.66■□□□□ 0.58
SS18-224ENST00000584083 C3orf30Q96M34 536 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 UBQLN3Q9H347 655 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 MAPRE3Q9UPY8 281 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 RNF6Q9Y252 685 aa18.66■□□□□ 0.58
SS18-224ENST00000584083 SNPHO15079 494 aa18.65■□□□□ 0.58
SS18-224ENST00000584083 ITM2AO43736 263 aa18.65■□□□□ 0.58
SS18-224ENST00000584083 TBX19O60806 448 aa18.65■□□□□ 0.58
SS18-224ENST00000584083 LYPLA1O75608 230 aaPredicted RBP18.65■□□□□ 0.58
SS18-224ENST00000584083 ZWINTO95229 277 aa18.65■□□□□ 0.58
SS18-224ENST00000584083 SERPINE1P05121 402 aa18.65■□□□□ 0.58
SS18-224ENST00000584083 HPNP05981 417 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms