RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	OR51B5	Q9H339	312 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	NT5DC2	Q9H857	520 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	LYRM4	Q9HD34	91 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ACKR4	Q9NPB9	350 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MTO1	Q9Y2Z2	717 aa	Known RBP	7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	KCNE2	Q9Y6J6	123 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CLCA3P	Q9Y6N3	262 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	HIVEP2	P31629	2446 aa		7.16	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SVEP1	Q4LDE5	3571 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ABCA1	O95477	2261 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438		A0A1W2PR48	441 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MBD3L4	A6NDZ8	208 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MBD3L3	A6NE82	208 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	TRIM64	A6NGJ6	449 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	TRIM64B	A6NI03	449 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MBD3L5	A6NJ08	208 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CLCA1	A8K7I4	914 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	DEFB108A	A8MXU0	73 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ACSL3	O95573	720 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438		P04436	131 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CD1D	P15813	335 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	BMP7	P18075	431 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	GNAZ	P19086	355 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	HIST1H1T	P22492	207 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	TIMP3	P35625	211 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CDK9	P50750	372 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	NAGLU	P54802	743 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SCAND1	P57086	179 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SKP1	P63208	163 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MRPS25	P82663	173 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SARNP	P82979	210 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CAPRIN1	Q14444	709 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CT83	Q5H943	113 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SLC22A10	Q63ZE4	541 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	NIPAL1	Q6NVV3	410 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	TRIM40	Q6P9F5	258 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	OPN5	Q6U736	354 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CLEC9A	Q6UXN8	241 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	CXXC5	Q7LFL8	322 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ADGRE4P	Q86SQ3	457 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	BIVM	Q86UB2	503 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	PALM2	Q8IXS6	379 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	LINC01356	Q8N9X3	169 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	BBOF1	Q8ND07	529 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	IGFBPL1	Q8WX77	278 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	DAZL	Q92904	295 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ADIPOR1	Q96A54	375 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	SARAF	Q96BY9	339 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	FBXL20	Q96IG2	436 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	VPS39	Q96JC1	886 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	JSRP1	Q96MG2	331 aa	Predicted RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	GNRHR2	Q96P88	292 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	EGFL8	Q99944	293 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	LDAH	Q9H6V9	325 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	MOCS1	Q9NZB8	636 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	PTBP2	Q9UKA9	531 aa	Known RBP	7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ASB4	Q9Y574	426 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438	ANK2	Q01484	3957 aa		7.15	□□□□□ -1.26
PPP4R1-225	ENST00000583438		A0A0A6YYD5	115 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	C15orf38-AP3S2	A0A0A6YYH1	394 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	URAD	A6NGE7	173 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	HSPB2	A8KAH6	182 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	INAFM1	C9JVW0	142 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438		H7C1Q1	480 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	PGRMC2	O15173	223 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	GBA	P04062	536 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	MTHFD2	P13995	350 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	PTMS	P20962	102 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	S1PR1	P21453	382 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	GDF1	P27539	372 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	CFP	P27918	469 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	PCSK6	P29122	969 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	PTPN6	P29350	595 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	OPRM1	P35372	400 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	CASP2	P42575	452 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	MSH2	P43246	934 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	KCNJ2	P63252	427 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	TNFRSF17	Q02223	184 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	STX4	Q12846	297 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	CHIT1	Q13231	466 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	HSPB2	Q16082	182 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	NNAT	Q16517	81 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	NSUN5P2	Q63ZY6	315 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	C1QL4	Q86Z23	238 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	LAS2	Q8IYD9	372 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	GCNT2	Q8N0V5	402 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	ZNF615	Q8N8J6	731 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	PDPR	Q8NCN5	879 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	OR7G3	Q8NG95	312 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	SPPL2A	Q8TCT8	520 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	MAIP1	Q8WWC4	291 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	EXT2	Q93063	718 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	FAR2	Q96K12	515 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	RILP	Q96NA2	401 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	GAL3ST4	Q96RP7	486 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	NODAL	Q96S42	347 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	OSBPL9	Q96SU4	736 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	TUBA1C	Q9BQE3	449 aa		7.14	□□□□□ -1.27
PPP4R1-225	ENST00000583438	DERL2	Q9GZP9	239 aa		7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms