RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CHRNEQ04844 493 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 PIGFQ07326 219 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 PRSS41Q7RTY9 318 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 ZNF438Q7Z4V0 828 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 MCATQ8IVS2 390 aaKnown RBP21.19■□□□□ 0.98
CCDC47-204ENST00000582252 ZNF675Q8TD23 568 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 APH1BQ8WW43 257 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 SLC9A6Q92581 669 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 MYDGFQ969H8 173 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 SLC35A4Q96G79 324 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 COG8Q96MW5 612 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 RSPO3Q9BXY4 272 aaPredicted RBP21.19■□□□□ 0.98
CCDC47-204ENST00000582252 WARS2Q9UGM6 360 aaKnown RBP21.19■□□□□ 0.98
CCDC47-204ENST00000582252 NINQ8N4C6 2090 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 CACNA1HO95180 2353 aa21.19■□□□□ 0.98
CCDC47-204ENST00000582252 SH3PXD2BA1X283 911 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ZAR1LA6NP61 321 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 AQP9O43315 295 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 HOXD12P35452 270 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 EMX1Q04741 257 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PTGES3Q15185 160 aaKnown RBP21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ARHGAP11BQ3KRB8 267 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ADAMTS18Q8TE60 1221 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ARHGDIGQ99819 225 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 MTHFD2LQ9H903 347 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-204ENST00000582252 FAM60AQ9NP50 221 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 FTSJ1Q9UET6 329 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ZNF232Q9UNY5 417 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PCDHGA10Q9Y5H3 936 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 LAMA1P25391 3075 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 SLC9B1P1A6NJY1 282 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 FGF17O60258 216 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PLOD3O60568 738 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 DNAJB6O75190 326 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 SOX30O94993 753 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ALOX5P09917 674 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 CTSKP43235 329 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 GSSP48637 474 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 COX10Q12887 443 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PEAR1Q5VY43 1037 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-204ENST00000582252 LAIR1Q6GTX8 287 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 Q6ZPB1 254 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PEX5LQ8IYB4 626 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 CDRT4Q8N9R6 151 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 OR6T1Q8NGN1 323 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 OR52P1PQ8NH57 321 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 CDS1Q92903 461 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 FUZQ9BT04 418 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 PIGUQ9H490 435 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 ANKRA2Q9H9E1 313 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 TMEM74BQ9NUR3 256 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 WDR45Q9Y484 360 aa21.18■□□□□ 0.98
CCDC47-204ENST00000582252 VPS13AQ96RL7 3174 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 LDB3O75112 727 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 SEMA7AO75326 666 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 NME6O75414 186 aaPredicted RBP21.17■□□□□ 0.98
CCDC47-204ENST00000582252 AK1P00568 194 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 CCNA2P20248 432 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 CHMP24386 653 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 PPM1FP49593 454 aaPredicted RBP21.17■□□□□ 0.98
CCDC47-204ENST00000582252 ILKQ13418 452 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 PIN1Q13526 163 aaPredicted RBP21.17■□□□□ 0.98
CCDC47-204ENST00000582252 SMN1Q16637 294 aaKnown RBP21.17■□□□□ 0.98
CCDC47-204ENST00000582252 PRTGQ2VWP7 1150 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 EIPR1Q53HC9 387 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 FHL5Q5TD97 284 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 OLIG3Q7RTU3 272 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 RABEPKQ7Z6M1 372 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 DNAJC22Q8N4W6 341 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 SLC16A11Q8NCK7 471 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 OR5T3Q8NGG3 340 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 FAR1Q8WVX9 515 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 FCGR1BQ92637 280 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 PIGKQ92643 395 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 STACQ99469 402 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 BCL7BQ9BQE9 202 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 AASSQ9UDR5 926 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 SATB2Q9UPW6 733 aa21.17■□□□□ 0.98
CCDC47-204ENST00000582252 MRPS33Q9Y291 106 aaKnown RBP21.17■□□□□ 0.98
CCDC47-204ENST00000582252 ARID1BQ8NFD5 2236 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-204ENST00000582252 LMO7DNF2Z398 122 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 SGK494L7N484 410 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 RDH16O75452 317 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 EPPINO95925 133 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 MT-ND2P03891 347 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 IFNGR2P38484 337 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 PDX1P52945 283 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 TAS2R41P59536 307 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 FOXD4Q12950 439 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-204ENST00000582252 LARS2Q15031 903 aaKnown RBP21.16■□□□□ 0.98
CCDC47-204ENST00000582252 SEC23BQ15437 767 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 DEFB110Q30KQ9 67 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 PGBD2Q6P3X8 592 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 C17orf82Q86X59 251 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-204ENST00000582252 SLC7A13Q8TCU3 470 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 SLC38A4Q969I6 547 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 UBE2FQ969M7 185 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 ANKRD19PQ9H560 264 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 DUSP22Q9NRW4 184 aa21.16■□□□□ 0.98
CCDC47-204ENST00000582252 STARD5Q9NSY2 213 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms