RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 STAC2Q6ZMT1 411 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 TEX9Q8N6V9 391 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
SS18-219ENST00000581570 OR4K17Q8NGC6 315 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 TMBIM1Q969X1 311 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 AMBRA1Q9C0C7 1298 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 ALG9Q9H6U8 611 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PLSCR4Q9NRQ2 329 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 MAT2BQ9NZL9 334 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PRODH2Q9UF12 536 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 PLLPQ9Y342 182 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 ANGPTL3Q9Y5C1 460 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 HEATR5AQ86XA9 2040 aa11.45□□□□□ -0.58
SS18-219ENST00000581570 GOLGA6L10A0A0M3HER8 536 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 SUPT3HB4E1H0 165 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 H0YIV9 168 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 UBXN8O00124 270 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 SEC14L5O43304 696 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ADAM11O75078 769 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 SUPT3HO75486 399 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 PIAS1O75925 651 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ALDOAP04075 364 aaKnown RBP11.44□□□□□ -0.58
SS18-219ENST00000581570 SOD3P08294 240 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 STMN1P16949 149 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 IVDP26440 423 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ARL4CP56559 192 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 GUSBP1Q15486 140 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 CPSF6Q16630 551 aaKnown RBP eCLIP11.44□□□□□ -0.58
SS18-219ENST00000581570 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ADAM5Q6NVV9 412 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 FBXO36Q8NEA4 188 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 OR52R1Q8NGF1 315 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 LILRB1Q8NHL6 650 aaPredicted RBP11.44□□□□□ -0.58
SS18-219ENST00000581570 RAB3IL1Q8TBN0 382 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 UBTD2Q8WUN7 234 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 SLC35A4Q96G79 324 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 UBXN10Q96LJ8 280 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ADOQ96SZ5 270 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 LRRC1Q9BTT6 524 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 C19orf24Q9BVV8 132 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 FANCFQ9NPI8 374 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ZNF639Q9UID6 485 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 LIPT1Q9Y234 373 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 ZNF337Q9Y3M9 751 aa11.44□□□□□ -0.58
SS18-219ENST00000581570 GOLGA6L10A6NI86 522 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 B4DXG7 233 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 FOXE1O00358 373 aaPredicted RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 GPRIN2O60269 458 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 CBX7O95931 251 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 IGHV4-39P01824 125 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 KLK1P06870 262 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 DANCRP0C864 163 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 HK1P19367 917 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 DEKP35659 375 aaKnown RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 FEN1P39748 380 aaKnown RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 EMDP50402 254 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 RPS3AP61247 264 aaKnown RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 EFR3AQ14156 821 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 SLMAPQ14BN4 828 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 TRMT12Q53H54 448 aaKnown RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 C6orf52Q5T4I8 152 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 DNM1P46Q6ZS02 220 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 ISCA2Q86U28 154 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 OR6K3Q8NGY3 331 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 SMAP2Q8WU79 429 aaPredicted RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 FBXW5Q969U6 566 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 SERPINI1Q99574 410 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 BEX2Q9BXY8 128 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 ACTR6Q9GZN1 396 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 DSN1Q9H410 356 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 SMYD2Q9NRG4 433 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 GPR55Q9Y2T6 319 aaPredicted RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 EMC9Q9Y3B6 208 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 RNF115Q9Y4L5 304 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 MAGED1Q9Y5V3 778 aaPredicted RBP11.43□□□□□ -0.58
SS18-219ENST00000581570 ABCA1O95477 2261 aa11.43□□□□□ -0.58
SS18-219ENST00000581570 C17orf51A8MQB3 221 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 H3BML4 177 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CLOCKO15516 846 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 TSPAN2O60636 221 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 ERAL1O75616 437 aaKnown RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 AQP8O94778 261 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 ATP1B1P05026 303 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 FCGR2AP12318 317 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CSNK2A2P19784 350 aaPredicted RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 CDC25BP30305 580 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 KRT20P35900 424 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 GAS1P54826 345 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 CLDN20P56880 219 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 GPX6P59796 221 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 RAB10P61026 200 aa11.42□□□□□ -0.58
SS18-219ENST00000581570 PDIA2Q13087 525 aaKnown RBP11.42□□□□□ -0.58
SS18-219ENST00000581570 FASTKD3Q14CZ7 662 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms