RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SDF2Q99470 211 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CDC6Q99741 560 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 WDR77Q9BQA1 342 aaPredicted RBP5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CRB3Q9BUF7 120 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 AMBRA1Q9C0C7 1298 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 NXF5Q9H1B4 397 aaKnown RBP5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 OR10A5Q9H207 317 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 PIGUQ9H490 435 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 SMURF2Q9HAU4 748 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CLK4Q9HAZ1 481 aaKnown RBP5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 RLIMQ9NVW2 624 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 NDUFAF4Q9P032 175 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 C6orf203Q9P0P8 240 aaPredicted RBP5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 C3orf18Q9UK00 162 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 OAZ3Q9UMX2 235 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 SATB2Q9UPW6 733 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 TESMINQ9Y4I5 508 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GPC6Q9Y625 555 aaPredicted RBP5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 U3KQV3 271 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 NCOR1O75376 2440 aa5.71□□□□□ -1.5
RNU4ATAC-201ENST00000580972 DLGAP1O14490 977 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 EI24O14681 340 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 FFAR1O14842 300 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 PLD2O14939 933 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 HNRNPRO43390 633 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MAN1A2O60476 641 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 TPST2O60704 377 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ZNF354AO60765 605 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MITFO75030 526 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 COQ9O75208 318 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 KCNK2O95069 426 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 DLGAP3O95886 979 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ONECUT2O95948 504 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CST1P01037 141 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 IGKV3-11P04433 115 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CAPNS1P04632 268 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ALPPP05187 535 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 FABP3P05413 133 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 FESP07332 822 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 JMJD7P0C870 316 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CT45A8P0DMV1 189 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CT45A9P0DMV2 189 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 UMPSP11172 480 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 PRG2P13727 222 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ZNF26P17031 533 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 F8A1P23610 371 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 FASP25445 335 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 SLC5A2P31639 672 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MAGEA2P43356 314 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 KCNJ5P48544 419 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 SLC37A1P57057 533 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 LSM11P83369 360 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 OCA2Q04671 838 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 TARDBPQ13148 414 aaKnown RBP eCLIP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 SERTAD2Q14140 314 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GK3PQ14409 553 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 IL11RAQ14626 422 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GANABQ14697 944 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ELAVL1Q15717 326 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GPR68Q15743 365 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 IFI44LQ53G44 452 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CT45A2Q5DJT8 189 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 C6orf52Q5T4I8 152 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ATAD3BQ5T9A4 648 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 IRAK1BP1Q5VVH5 260 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 NIPAL1Q6NVV3 410 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MRPL14Q6P1L8 145 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 BHLHB9Q6PI77 547 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 DEF8Q6ZN54 512 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ZNF836Q6ZNA1 936 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 PATL1Q86TB9 770 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CARM1Q86X55 608 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MEX3DQ86XN8 651 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ARMC8Q8IUR7 673 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CDRT4Q8N9R6 151 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GATSQ8NAP1 163 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GOLM1Q8NBJ4 401 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CHDHQ8NE62 594 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 PLPP5Q8NEB5 264 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 NFAM1Q8NET5 270 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 THAP3Q8WTV1 239 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 HOXB13Q92826 284 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 EFHD2Q96C19 240 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 LIN37Q96GY3 246 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CENPNQ96H22 339 aaPredicted RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 FBXL20Q96IG2 436 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ZNF570Q96NI8 536 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 TRNT1Q96Q11 434 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 GAL3ST4Q96RP7 486 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 CMKLR1Q99788 373 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 LMF2Q9BU23 707 aaKnown RBP5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 DOHHQ9BU89 302 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 UGT2B28Q9BY64 529 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 KLHL4Q9C0H6 718 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 STRADBQ9C0K7 418 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 TGIF2Q9GZN2 237 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 ZNF350Q9GZX5 532 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 MAGIXQ9H6Y5 334 aa5.7□□□□□ -1.5
RNU4ATAC-201ENST00000580972 BCL2L10Q9HD36 194 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms