RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NUP54Q7Z3B4 507 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 LUZP1Q86V48 1076 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 LRRC57Q8N9N7 239 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 C7orf57Q8NEG2 295 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 C17orf47Q8NEP4 570 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 PIWIL2Q8TC59 973 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 FAM216AQ8WUB2 273 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 TANKQ92844 425 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 OMA1Q96E52 524 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 TBCDQ9BTW9 1192 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 MS4A8Q9BY19 250 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 BHLHE41Q9C0J9 482 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 OR10A5Q9H207 317 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 EHD3Q9NZN3 535 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 PACSIN2Q9UNF0 486 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 ZNF337Q9Y3M9 751 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 PCDHGB1Q9Y5G3 927 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 MAD1L1Q9Y6D9 718 aa6.82□□□□□ -1.32
SMARCE1-217ENST00000580654 EFCAB8A8MWE9 144 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 E7EQL1 145 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 H7C417 338 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 MFAP3LO75121 409 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SH3BGRLO75368 114 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 WDR47O94967 919 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 NTN1O95631 604 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 GPR75O95800 540 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 PTMAP06454 111 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 ENO2P09104 434 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 CSF3P09919 207 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 S1PR1P21453 382 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 TTKP33981 857 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SRP14P37108 136 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 NR4A2P43354 598 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 NEK2P51955 445 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 GAS1P54826 345 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 CDH11P55287 796 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 BASP1P80723 227 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 TGM3Q08188 693 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 POU4F2Q12837 409 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SLAMF1Q13291 335 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SNX1Q13596 522 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 THOC5Q13769 683 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 P2RY6Q15077 328 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 NKAPLQ5M9Q1 402 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 GABRG1Q8N1C3 465 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 KRT78Q8N1N4 520 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 AGGF1Q8N302 714 aaeCLIP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 METTL25Q8N6Q8 603 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SNX31Q8N9S9 440 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 STEAP2Q8NFT2 490 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 OR5M1Q8NGP8 315 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 ZNF473Q8WTR7 871 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 RNF138Q8WVD3 245 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 C1orf54Q8WWF1 131 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 PMM1Q92871 262 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 C3orf49Q96BT1 292 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 VPS39Q96JC1 886 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 PELOQ9BRX2 385 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 TRIM54Q9BYV2 358 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 ROGDIQ9GZN7 287 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 FOLH1BQ9HBA9 442 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 CBLN4Q9NTU7 201 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 FAIMQ9NVQ4 179 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 TAS2R13Q9NYV9 303 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 TMEFF2Q9UIK5 374 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 DKKL1Q9UK85 242 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 EMC9Q9Y3B6 208 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 SPACA6W5XKT8 324 aa6.81□□□□□ -1.32
SMARCE1-217ENST00000580654 PABPN1LA6NDY0 278 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 GLOD5A6NK44 160 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 AP3B1O00203 1094 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 SAP18O00422 153 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 RGS9O75916 674 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 ALX3O95076 343 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 ALDOAP04075 364 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 FESP07332 822 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 SLC35E2BP0CK96 405 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 SLC35E2P0CK97 266 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 KRT15P19012 456 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 TPSB2P20231 275 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 HPDP32754 393 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 SSR2P43308 183 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 EFNA4P52798 201 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 EEFSECP57772 596 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 IL2P60568 153 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 TPSAB1Q15661 275 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 SFRP5Q5T4F7 317 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 ARFGEF3Q5TH69 2177 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 MFSD12Q6NUT3 480 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 B3GLCTQ6Y288 498 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 DEF8Q6ZN54 512 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 PEG10Q86TG7 708 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 GGNQ86UU5 652 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 GPR180Q86V85 440 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 CCDC89Q8N998 374 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 HSD17B8Q92506 261 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 NXNL1Q96CM4 212 aa6.8□□□□□ -1.32
SMARCE1-217ENST00000580654 WDR34Q96EX3 536 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms