RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CDC26Q8NHZ8 85 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 ZPLD1Q8TCW7 415 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 NINJ1Q92982 152 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 EFHD2Q96C19 240 aaPredicted RBP8.11□□□□□ -1.11
GGA3-207ENST00000578896 LRRC46Q96FV0 321 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 COL21A1Q96P44 957 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TMEM237Q96Q45 408 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 SMR3AQ99954 134 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 YIPF4Q9BSR8 244 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 FAIM2Q9BWQ8 316 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 ACPTQ9BZG2 426 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 OR2B2Q9GZK3 357 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 CALHM2Q9HA72 323 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 BRF2Q9HAW0 419 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 GALNT8Q9NY28 637 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TAS2R10Q9NYW0 307 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 FLRT3Q9NZU0 649 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 JKAMPQ9P055 326 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 VPS29Q9UBQ0 182 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 PRODH2Q9UF12 536 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 PSME2Q9UL46 239 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 CFL2Q9Y281 166 aa8.11□□□□□ -1.11
GGA3-207ENST00000578896 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
GGA3-207ENST00000578896 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 FREM1Q5H8C1 2179 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 GNG14A0A1W2PPG7 69 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FRG2CA6NGY1 282 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 PLOD2O00469 737 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 TO15178 435 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ACOX3O15254 700 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SCO2O43819 266 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 GMFGO60234 142 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 PCDH7O60245 1069 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ZIC3O60481 467 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 TSPAN2O60636 221 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ERN1O75460 977 aaKnown RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 ATE1O95260 518 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ACTL6AO96019 429 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 HRGP04196 525 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SNRPAP09012 282 aaKnown RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 CT45A8P0DMV1 189 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CT45A9P0DMV2 189 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CPN1P15169 458 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 HMOX2P30519 316 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CPA2P48052 419 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 LHX2P50458 406 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FOXA1P55317 472 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 GFRA1P56159 465 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 STX5Q13190 355 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 KEAP1Q14145 624 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CT45A2Q5DJT8 189 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SH2D4BQ5SQS7 431 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 GPRIN3Q6ZVF9 776 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 LARP4Q71RC2 724 aaKnown RBP eCLIP8.1□□□□□ -1.11
GGA3-207ENST00000578896 TAOK1Q7L7X3 1001 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 IFNEQ86WN2 208 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 KIF18BQ86Y91 864 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 PLCZ1Q86YW0 608 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SLC44A2Q8IWA5 706 aaPredicted RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 UBQLNLQ8IYU4 475 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 MMGT1Q8N4V1 131 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CHDHQ8NE62 594 aaPredicted RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 OR7G2Q8NG99 324 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 VSTM2LQ96N03 204 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SFXN2Q96NB2 322 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FMO2Q99518 471 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 C1QTNF3Q9BXJ4 246 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 RTN4RQ9BZR6 473 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 PLEKHF2Q9H8W4 249 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FOLH1BQ9HBA9 442 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FETUBQ9UGM5 382 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 MCM8Q9UJA3 840 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
GGA3-207ENST00000578896 DKKL1Q9UK85 242 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 WIF1Q9Y5W5 379 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 CADP27708 2225 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 ALPK2Q86TB3 2170 aa8.1□□□□□ -1.11
GGA3-207ENST00000578896 SONP18583 2426 aaKnown RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 A0A087WUV0 522 aaPredicted RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 EXOC1LA0A1B0GW35 172 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SH3D21A4FU49 640 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 OR6C70A6NIJ9 312 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 CDH16O75309 829 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ULK1O75385 1050 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SMNDC1O75940 238 aaKnown RBP eCLIP8.09□□□□□ -1.111e-6■■■■■ 28.6
GGA3-207ENST00000578896 RCBTB2O95199 551 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 IL18BPO95998 194 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 KRT6AP02538 564 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 RAF1P04049 648 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 KRT6BP04259 564 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 JUNP05412 331 aaKnown RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 RHOXF2BP0C7M4 288 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 GRK2P25098 689 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms