RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ERRFI1Q9UJM3 462 aaPredicted RBP17.73■□□□□ 0.43
SS18-208ENST00000577751 SLC5A6Q9Y289 635 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 NCKAP5O14513 1909 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 GTF3C1Q12789 2109 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 TTC36A6NLP5 189 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 FAM166BA8MTA8 275 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 ACOT7O00154 380 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 ABCB7O75027 752 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 SNX4O95219 450 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 ALDOCP09972 364 aaKnown RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 EFNA1P20827 205 aaPredicted RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 EPHA3P29320 983 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 HSF1Q00613 529 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 RBPJQ06330 500 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 ZNF155Q12901 538 aaPredicted RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 CYP27C1Q4G0S4 372 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 C4orf17Q53FE4 359 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 BICRALQ6AI39 1079 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 Q6ZPB1 254 aaPredicted RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 MAVSQ7Z434 540 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 SPATA19Q7Z5L4 167 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 FGD2Q7Z6J4 655 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 SLC44A2Q8IWA5 706 aaPredicted RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 FAM109AQ8N4B1 249 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 NUP43Q8NFH3 380 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 OR4N2Q8NGD1 307 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 CEP70Q8NHQ1 597 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 LRRC8CQ8TDW0 803 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 RELTQ969Z4 430 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 GIMAP5Q96F15 307 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 NODALQ96S42 347 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 DOHHQ9BU89 302 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 DUSP26Q9BV47 211 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 C3orf14Q9HBI5 128 aa17.72■□□□□ 0.43
SS18-208ENST00000577751 BOKQ9UMX3 212 aaPredicted RBP17.72■□□□□ 0.43
SS18-208ENST00000577751 WIPF3A6NGB9 483 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 LRRC3CA6NJW4 275 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 EMC8O43402 210 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 SLC19A2O60779 497 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 REM1O75628 298 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 AGFG2O95081 481 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 PTGDSP41222 190 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 PNLIPRP2P54317 469 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 SNTA1Q13424 505 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 GAB1Q13480 694 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 SPPL2CQ8IUH8 684 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 OR8J2Q8NGG1 315 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 TESCQ96BS2 214 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 FAM120BQ96EK7 910 aaKnown RBP17.71■□□□□ 0.43
SS18-208ENST00000577751 RILPQ96NA2 401 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 COL21A1Q96P44 957 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 ADOQ96SZ5 270 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 DPY30Q9C005 99 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 DEFB127Q9H1M4 99 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 INTS9Q9NV88 658 aaKnown RBP17.71■□□□□ 0.43
SS18-208ENST00000577751 AIG1Q9NVV5 245 aa17.71■□□□□ 0.43
SS18-208ENST00000577751 NUP214P35658 2090 aaPredicted RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 GOLGA8QA0A0J9YX86 632 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 A0A1B0GUH1 482 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 GOLGA8OA6NCC3 632 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 GOLGA8NF8WBI6 632 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 IGHG3P01860 377 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 RFPL3SP0C7P2 107 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 CA7P43166 264 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 MAGEA5P43359 124 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 WNT3P56703 355 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 ZNHIT3Q15649 155 aaPredicted RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 LSM12Q3MHD2 195 aaKnown RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 SLC9B1Q4ZJI4 515 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 EXOSC6Q5RKV6 272 aaKnown RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 FNDC7Q5VTL7 733 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 TMEM198Q66K66 360 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 ZCCHC12Q6PEW1 402 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 WDR53Q7Z5U6 358 aaPredicted RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 RNF138Q8WVD3 245 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 TMEM41AQ96HV5 264 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 MS4A4EQ96PG1 132 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 ACBD3Q9H3P7 528 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 ZNF703Q9H7S9 590 aaPredicted RBP17.7■□□□□ 0.42
SS18-208ENST00000577751 Q9N2J8 555 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 SLCO1B3Q9NPD5 702 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 QPCTLQ9NXS2 382 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 CBLCQ9ULV8 474 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 OR10H1Q9Y4A9 318 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 GPR45Q9Y5Y3 372 aa17.7■□□□□ 0.42
SS18-208ENST00000577751 USP9XQ93008 2570 aaPredicted RBP17.69■□□□□ 0.42
SS18-208ENST00000577751 A0A1B0GTH9 108 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 ZNHIT1O43257 154 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 LRRTM2O43300 516 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 SCN2BO60939 215 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 ICOSLGO75144 302 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 NKX2-2O95096 273 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 C6orf47O95873 294 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 LDLRP01130 860 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PRKAG1P54619 331 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PHC1P78364 1004 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PRR5P85299 388 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 EFR3AQ14156 821 aa17.69■□□□□ 0.42
SS18-208ENST00000577751 PGS1Q32NB8 556 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms